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INSTALL report for INSPEcT on tokay1

This page was generated on 2019-04-13 11:25:40 -0400 (Sat, 13 Apr 2019).

Package 778/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
INSPEcT 1.12.2
Stefano de Pretis
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/INSPEcT
Branch: RELEASE_3_8
Last Commit: 4bd62ca
Last Changed Date: 2019-04-04 06:36:01 -0400 (Thu, 04 Apr 2019)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: INSPEcT
Version: 1.12.2
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/INSPEcT_1.12.2.tar.gz && rm -rf INSPEcT.buildbin-libdir && mkdir INSPEcT.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=INSPEcT.buildbin-libdir INSPEcT_1.12.2.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL INSPEcT_1.12.2.zip && rm INSPEcT_1.12.2.tar.gz INSPEcT_1.12.2.zip
StartedAt: 2019-04-12 20:00:29 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 20:02:05 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 95.7 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/INSPEcT_1.12.2.tar.gz && rm -rf INSPEcT.buildbin-libdir && mkdir INSPEcT.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=INSPEcT.buildbin-libdir INSPEcT_1.12.2.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL INSPEcT_1.12.2.zip && rm INSPEcT_1.12.2.tar.gz INSPEcT_1.12.2.zip
###
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install for i386

* installing *source* package 'INSPEcT' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'INSPEcT'
    finding HTML links ... done
    AIC-INSPEcT-method                      html  
    Extract                                 html  
    INSPEcT-class                           html  
    finding level-2 HTML links ... done

    INSPEcT-shinyApps                       html  
    INSPEcT                                 html  
    INSPEcT_diffsteady-class                html  
    INSPEcT_model-class                     html  
    allcounts                               html  
    chisqmodel                              html  
    chisqtest                               html  
    combine                                 html  
    compareSteady                           html  
    compareSteadyNoNascent                  html  
    dim-INSPEcT-method                      html  
    featureNames-INSPEcT-method             html  
    featureWidths                           html  
    geneClass                               html  
    getModel                                html  
    inHeatmap                               html  
    labeledSF                               html  
    libsizes                                html  
    logLik                                  html  
    makeModelRates                          html  
    makeSimDataset                          html  
    makeSimModel                            html  
    modelRates                              html  
    modelSelection                          html  
    modelingParams                          html  
    nGenes                                  html  
    nTpts                                   html  
    newINSPEcT                              html  
    plotGene                                html  
    plotMA                                  html  
    processingDelay                         html  
    quantifyExpressionsFromBAMs             html  
    quantifyExpressionsFromTrAbundance      html  
    quantifyExpressionsFromTrCounts         html  
    ratePvals                               html  
    ratesFirstGuess                         html  
    ratesFirstGuessVar                      html  
    removeModel                             html  
    rocCurve                                html  
    rocThresholds                           html  
    sfPlot                                  html  
    simData3rep_Nascent                     html  
    simData3rep_NoNascent                   html  
    simData4rep_Nascent                     html  
    simData4rep_NoNascent                   html  
    split                                   html  
    tpts                                    html  
    viewModelRates                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'INSPEcT' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'INSPEcT' as INSPEcT_1.12.2.zip
* DONE (INSPEcT)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'INSPEcT' successfully unpacked and MD5 sums checked
In R CMD INSTALL