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INSTALL report for phenoDist on tokay1

This page was generated on 2018-04-30 09:33:15 -0400 (Mon, 30 Apr 2018).

Package 1085/1559HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
phenoDist 1.27.1
Xian Zhang
Snapshot Date: 2018-04-29 16:46:14 -0400 (Sun, 29 Apr 2018)
URL: https://git.bioconductor.org/packages/phenoDist
Branch: master
Last Commit: 1ee5fb4
Last Changed Date: 2018-03-16 12:49:42 -0400 (Fri, 16 Mar 2018)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  ERROR  skipped 
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] ERROR  skipped  skipped 
merida1 OS X 10.11.6 El Capitan / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: phenoDist
Version: 1.27.1
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/phenoDist_1.27.1.tar.gz && rm -rf phenoDist.buildbin-libdir && mkdir phenoDist.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=phenoDist.buildbin-libdir phenoDist_1.27.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL phenoDist_1.27.1.zip && rm phenoDist_1.27.1.tar.gz phenoDist_1.27.1.zip
StartedAt: 2018-04-29 19:34:03 -0400 (Sun, 29 Apr 2018)
EndedAt: 2018-04-29 19:34:31 -0400 (Sun, 29 Apr 2018)
EllapsedTime: 28.0 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/phenoDist_1.27.1.tar.gz && rm -rf phenoDist.buildbin-libdir && mkdir phenoDist.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=phenoDist.buildbin-libdir phenoDist_1.27.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL phenoDist_1.27.1.zip && rm phenoDist_1.27.1.tar.gz phenoDist_1.27.1.zip
###
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install for i386

* installing *source* package 'phenoDist' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'phenoDist'
    finding HTML links ... done
    PDMByFactorAnalysis                     html  
    PDMByKS                                 html  
    PDMBySvmAccuracy                        html  
    PDMBySvmWeightVector                    html  
    PDMByWellAvg                            html  
    clusterDist                             html  
    ctlSeparatn                             html  
    distToNeg                               html  
    enrichAnalysis                          html  
    repCorr                                 html  
    repDistRank                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: Package 'phenoDist' is deprecated and will be removed from Bioconductor
  version 3.7
In R CMD INSTALL

install for x64

* installing *source* package 'phenoDist' ...
** testing if installed package can be loaded
Warning: Package 'phenoDist' is deprecated and will be removed from Bioconductor
  version 3.7
* MD5 sums
packaged installation of 'phenoDist' as phenoDist_1.27.1.zip
* DONE (phenoDist)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'phenoDist' successfully unpacked and MD5 sums checked
In R CMD INSTALL