Guangchuang Yu
| Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019) |
| URL: https://git.bioconductor.org/packages/clusterProfiler |
| Branch: RELEASE_3_8 |
| Last Commit: 39927ef |
| Last Changed Date: 2018-12-20 03:15:27 -0400 (Thu, 20 Dec 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-13 11:21:34 -0400 (Sat, 13 Apr 2019).
| Package 279/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| clusterProfiler 3.10.1 Guangchuang Yu
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: clusterProfiler |
| Version: 3.10.1 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/clusterProfiler_3.10.1.tar.gz && rm -rf clusterProfiler.buildbin-libdir && mkdir clusterProfiler.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clusterProfiler.buildbin-libdir clusterProfiler_3.10.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL clusterProfiler_3.10.1.zip && rm clusterProfiler_3.10.1.tar.gz clusterProfiler_3.10.1.zip |
| StartedAt: 2019-04-12 19:36:17 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 19:37:25 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 67.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/clusterProfiler_3.10.1.tar.gz && rm -rf clusterProfiler.buildbin-libdir && mkdir clusterProfiler.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clusterProfiler.buildbin-libdir clusterProfiler_3.10.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL clusterProfiler_3.10.1.zip && rm clusterProfiler_3.10.1.tar.gz clusterProfiler_3.10.1.zip
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install for i386
* installing *source* package 'clusterProfiler' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'clusterProfiler'
finding HTML links ... done
DataSet html
GSEA html
Gff2GeneTable html
KEGG_path2extid html
bitr html
bitr_kegg html
browseKEGG html
buildGOmap html
clusterProfiler-package html
compareCluster html
compareClusterResult-class html
finding level-2 HTML links ... done
dotplot-methods html
download_KEGG html
dropGO html
enrichDAVID html
enrichGO html
enrichKEGG html
enrichMKEGG html
enricher html
fortify html
getGOLevel html
go2ont html
go2term html
gofilter html
groupGO html
groupGOResult-class html
gseGO html
gseKEGG html
gseMKEGG html
idType html
ko2name html
merge_result html
plotGOgraph html
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpaCUdsH/R.INSTALL16684ae97bac/clusterProfiler/man/plotGOgraph.Rd:30: file link 'showSigOfNodes' in package 'topGO' does not exist and so has been treated as a topic
plotting.clusterProfile html
read.gmt html
reexports html
search_kegg_organism html
simplify-methods html
uniprot_get html
viewKEGG html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'clusterProfiler' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'clusterProfiler' as clusterProfiler_3.10.1.zip
* DONE (clusterProfiler)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'clusterProfiler' successfully unpacked and MD5 sums checked
In R CMD INSTALL