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BUILD BIN report for clusterProfiler on tokay1

This page was generated on 2019-04-13 11:21:34 -0400 (Sat, 13 Apr 2019).

Package 279/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
clusterProfiler 3.10.1
Guangchuang Yu
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/clusterProfiler
Branch: RELEASE_3_8
Last Commit: 39927ef
Last Changed Date: 2018-12-20 03:15:27 -0400 (Thu, 20 Dec 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: clusterProfiler
Version: 3.10.1
Command: rm -rf clusterProfiler.buildbin-libdir && mkdir clusterProfiler.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clusterProfiler.buildbin-libdir clusterProfiler_3.10.1.tar.gz
StartedAt: 2019-04-13 07:04:44 -0400 (Sat, 13 Apr 2019)
EndedAt: 2019-04-13 07:05:14 -0400 (Sat, 13 Apr 2019)
EllapsedTime: 29.1 seconds
RetCode: 0
Status:  OK  
PackageFile: clusterProfiler_3.10.1.zip
PackageFileSize: 975.6 KiB

Command output

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###
### Running command:
###
###   rm -rf clusterProfiler.buildbin-libdir && mkdir clusterProfiler.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clusterProfiler.buildbin-libdir clusterProfiler_3.10.1.tar.gz
###
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install for i386

* installing *source* package 'clusterProfiler' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'clusterProfiler'
    finding HTML links ... done
    DataSet                                 html  
    GSEA                                    html  
    Gff2GeneTable                           html  
    KEGG_path2extid                         html  
    bitr                                    html  
    bitr_kegg                               html  
    browseKEGG                              html  
    buildGOmap                              html  
    clusterProfiler-package                 html  
    compareCluster                          html  
    compareClusterResult-class              html  
    finding level-2 HTML links ... done

    dotplot-methods                         html  
    download_KEGG                           html  
    dropGO                                  html  
    enrichDAVID                             html  
    enrichGO                                html  
    enrichKEGG                              html  
    enrichMKEGG                             html  
    enricher                                html  
    fortify                                 html  
    getGOLevel                              html  
    go2ont                                  html  
    go2term                                 html  
    gofilter                                html  
    groupGO                                 html  
    groupGOResult-class                     html  
    gseGO                                   html  
    gseKEGG                                 html  
    gseMKEGG                                html  
    idType                                  html  
    ko2name                                 html  
    merge_result                            html  
    plotGOgraph                             html  
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpIPFaJa/R.INSTALL19bc1112727a/clusterProfiler/man/plotGOgraph.Rd:30: file link 'showSigOfNodes' in package 'topGO' does not exist and so has been treated as a topic
    plotting.clusterProfile                 html  
    read.gmt                                html  
    reexports                               html  
    search_kegg_organism                    html  
    simplify-methods                        html  
    uniprot_get                             html  
    viewKEGG                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'clusterProfiler' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'clusterProfiler' as clusterProfiler_3.10.1.zip
* DONE (clusterProfiler)
In R CMD INSTALL
In R CMD INSTALL