Package: TCGAMethylation450k

Version: 1.16.0

Command: /home/biocbuild/bbs-3.7-bioc/R/bin/R CMD check --install=check:TCGAMethylation450k.install-out.txt --library=/home/biocbuild/bbs-3.7-bioc/R/library --no-vignettes --timings TCGAMethylation450k_1.16.0.tar.gz

StartedAt: 2018-10-16 11:31:46 -0400 (Tue, 16 Oct 2018)

EndedAt: 2018-10-16 11:32:01 -0400 (Tue, 16 Oct 2018)

EllapsedTime: 15.2 seconds

RetCode: 0

Status:  OK

CheckDir: TCGAMethylation450k.Rcheck

Warnings: 0

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.7-bioc/R/bin/R CMD check --install=check:TCGAMethylation450k.install-out.txt --library=/home/biocbuild/bbs-3.7-bioc/R/library --no-vignettes --timings TCGAMethylation450k_1.16.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.7-data-experiment/meat/TCGAMethylation450k.Rcheck’
* using R version 3.5.1 Patched (2018-07-12 r74967)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘TCGAMethylation450k/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘TCGAMethylation450k’ version ‘1.16.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘TCGAMethylation450k’ can be installed ... OK
* checking installed package size ... NOTE
  installed size is 154.5Mb
  sub-directories of 1Mb or more:
    extdata  154.4Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... NONE
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  ‘/home/biocbuild/bbs-3.7-data-experiment/meat/TCGAMethylation450k.Rcheck/00check.log’
for details.

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.7-bioc/R/bin/R CMD INSTALL TCGAMethylation450k
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.7-bioc/R/library’
* installing *source* package ‘TCGAMethylation450k’ ...
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (TCGAMethylation450k)