Back to Multiple platform build/check report for BioC 3.7 |
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This page was generated on 2018-10-17 08:42:58 -0400 (Wed, 17 Oct 2018).
Package 1439/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
statTarget 1.10.0 Hemi Luan
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | [ OK ] | OK | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: statTarget |
Version: 1.10.0 |
Command: C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:statTarget.install-out.txt --library=C:\Users\biocbuild\bbs-3.7-bioc\R\library --no-vignettes --timings statTarget_1.10.0.tar.gz |
StartedAt: 2018-10-17 05:03:43 -0400 (Wed, 17 Oct 2018) |
EndedAt: 2018-10-17 05:05:26 -0400 (Wed, 17 Oct 2018) |
EllapsedTime: 103.0 seconds |
RetCode: 0 |
Status: OK |
CheckDir: statTarget.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:statTarget.install-out.txt --library=C:\Users\biocbuild\bbs-3.7-bioc\R\library --no-vignettes --timings statTarget_1.10.0.tar.gz ### ############################################################################## ############################################################################## * using log directory 'C:/Users/biocbuild/bbs-3.7-bioc/meat/statTarget.Rcheck' * using R version 3.5.1 Patched (2018-07-24 r75005) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * using option '--no-vignettes' * checking for file 'statTarget/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'statTarget' version '1.10.0' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'statTarget' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking files in 'vignettes' ... OK * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK Examples with CPU or elapsed time > 5s user system elapsed statAnalysis 4.89 0.09 5.13 * checking for unstated dependencies in 'tests' ... OK * checking tests ... ** running tests for arch 'i386' ... Running 'testthat.R' OK ** running tests for arch 'x64' ... Running 'testthat.R' OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: OK
statTarget.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/statTarget_1.10.0.tar.gz && rm -rf statTarget.buildbin-libdir && mkdir statTarget.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=statTarget.buildbin-libdir statTarget_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL statTarget_1.10.0.zip && rm statTarget_1.10.0.tar.gz statTarget_1.10.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 150k 100 150k 0 0 1374k 0 --:--:-- --:--:-- --:--:-- 1474k install for i386 * installing *source* package 'statTarget' ... ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'statTarget' finding HTML links ... done shiftCor html statAnalysis html statTarget-package html statTargetGUI html transCode html transX html ** building package indices ** installing vignettes ** testing if installed package can be loaded In R CMD INSTALL install for x64 * installing *source* package 'statTarget' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'statTarget' as statTarget_1.10.0.zip * DONE (statTarget) In R CMD INSTALL In R CMD INSTALL * installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library' package 'statTarget' successfully unpacked and MD5 sums checked In R CMD INSTALL
statTarget.Rcheck/tests_i386/testthat.Rout R version 3.5.1 Patched (2018-07-24 r75005) -- "Feather Spray" Copyright (C) 2018 The R Foundation for Statistical Computing Platform: i386-w64-mingw32/i386 (32-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(statTarget) Use 'statTargetGUI()' to start the GUI program. For details see https://github.com/13479776/statTarget. > #library(statTarget) > datpath <- system.file("extdata",package = "statTarget") > samPeno <- paste(datpath,"MTBLS79_sampleList.csv", sep="/") > samFile <- paste(datpath,"MTBLS79.csv", sep="/") > file <- paste(datpath,"data_example_two_groups.csv", sep="/") > #statAnalysis(file, Frule = 0.8,imputeM = "KNN", glog = TRUE, test.multi=TRUE, nvarRF =10, scaling = "Pareto",silt = 500, pcax = 1, pcay = 2) > shiftCor(samPeno,samFile,Frule = 0.8,QCspan = 0.75, degree = 2,imputeM = "KNN") Data File Checking Start..., Time: Wed Oct 17 05:05:14 2018 172 Pheno Samples vs 172 Profile samples The Pheno samples list (*NA, missing data from the Profile File) [1] "batch01_QC01" "batch01_QC02" "batch01_QC03" "batch01_C05" "batch01_S07" [6] "batch01_C10" "batch01_QC04" "batch01_S01" "batch01_C03" "batch01_S05" [11] "batch01_C07" "batch01_S06" "batch01_QC05" "batch01_C08" "batch01_C06" [16] "batch01_S02" "batch01_S09" "batch01_QC06" "batch01_S04" "batch01_C04" [21] "batch01_S10" "batch01_C09" "batch01_QC07" "batch02_C05" "batch02_S03" [26] "batch02_S07" "batch02_C01" "batch02_C10" "batch02_QC08" "batch02_S01" [31] "batch02_C03" "batch02_S05" "batch02_C07" "batch02_S06" "batch02_QC09" [36] "batch02_C08" "batch02_C06" "batch02_S02" "batch02_S09" "batch02_C02" [41] "batch02_QC10" "batch02_S04" "batch02_S08" "batch02_C04" "batch02_S10" [46] "batch02_C09" "batch02_QC11" "batch03_C05" "batch03_S03" "batch03_S07" [51] "batch03_C01" "batch03_C10" "batch03_QC12" "batch03_S01" "batch03_C03" [56] "batch03_S05" "batch03_C07" "batch03_S06" "batch03_QC13" "batch03_C08" [61] "batch03_C06" "batch03_S02" "batch03_S09" "batch03_C02" "batch03_QC14" [66] "batch03_S04" "batch03_S08" "batch03_C04" "batch03_S10" "batch03_C09" [71] "batch03_QC15" "batch04_C05" "batch04_S03" "batch04_S07" "batch04_C01" [76] "batch04_QC16" "batch04_S01" "batch04_S05" "batch04_C07" "batch04_S06" [81] "batch04_QC17" "batch04_C08" "batch04_C06" "batch04_S02" "batch04_S09" [86] "batch04_C02" "batch04_QC18" "batch04_S08" "batch04_C04" "batch04_S10" [91] "batch04_QC19" "batch05_QC20" "batch05_S03" "batch05_S07" "batch05_C01" [96] "batch05_C10" "batch05_QC21" "batch05_S01" "batch05_C03" "batch05_C07" [101] "batch05_QC22" "batch05_C06" "batch05_C02" "batch05_QC23" "batch05_S04" [106] "batch05_S08" "batch05_C04" "batch05_QC24" "batch06_QC25" "batch06_S03" [111] "batch06_C10" "batch06_QC26" "batch06_S01" "batch06_C03" "batch06_S05" [116] "batch06_C07" "batch06_S06" "batch06_QC27" "batch06_C08" "batch06_C06" [121] "batch06_S02" "batch06_C02" "batch06_QC28" "batch06_S04" "batch06_S08" [126] "batch06_C04" "batch06_C09" "batch06_QC29" "batch07_QC30" "batch07_C05" [131] "batch07_S03" "batch07_S07" "batch07_C01" "batch07_C10" "batch07_QC31" [136] "batch07_C03" "batch07_S05" "batch07_C07" "batch07_S06" "batch07_QC32" [141] "batch07_C08" "batch07_S02" "batch07_S09" "batch07_C02" "batch07_QC33" [146] "batch07_S04" "batch07_S08" "batch07_S10" "batch07_C09" "batch07_QC34" [151] "batch08_C05" "batch08_S03" "batch08_S07" "batch08_C01" "batch08_C10" [156] "batch08_QC36" "batch08_S01" "batch08_C03" "batch08_S05" "batch08_C07" [161] "batch08_S06" "batch08_QC37" "batch08_C08" "batch08_S02" "batch08_S09" [166] "batch08_QC38" "batch08_S04" "batch08_S08" "batch08_C04" "batch08_S10" [171] "batch08_C09" "batch08_QC39" Phenotype information: Class No. 1 1 66 2 2 68 3 QC 38 Batch No. 1 1 91 2 2 17 3 3 20 4 4 44 Metabolic profile information: no. QC and samples 172 Metabolites 48 statTarget: shiftCor start...Time: Wed Oct 17 05:05:14 2018 Step 1: Evaluation of missing value... The number of NA value in Data Profile before QC-RLSC: 336 The number of variables including 80 % of missing value : 0 Step 2: Imputation start... The number of NA value in Data Profile after the initial imputation: 0 Imputation Finished! Step 3: QC-RLSC Start... Time: Wed Oct 17 05:05:14 2018 Warning: The QCspan was set at 0.75 | | | 0% | |= | 2% | |=== | 4% | |==== | 6% | |====== | 9% | |======= | 11% | |========= | 13% | |========== | 15% | |============ | 17% | |============= | 19% | |=============== | 21% | |================ | 23% | |================== | 26% | |=================== | 28% | |===================== | 30% | |====================== | 32% | |======================== | 34% | |========================= | 36% | |=========================== | 38% | |============================ | 40% | |============================== | 43% | |=============================== | 45% | |================================= | 47% | |================================== | 49% | |==================================== | 51% | |===================================== | 53% | |======================================= | 55% | |======================================== | 57% | |========================================== | 60% | |=========================================== | 62% | |============================================= | 64% | |============================================== | 66% | |================================================ | 68% | |================================================= | 70% | |=================================================== | 72% | |==================================================== | 74% | |====================================================== | 77% | |======================================================= | 79% | |========================================================= | 81% | |========================================================== | 83% | |============================================================ | 85% | |============================================================= | 87% | |=============================================================== | 89% | |================================================================ | 91% | |================================================================== | 94% | |=================================================================== | 96% | |===================================================================== | 98% | |======================================================================| 100% High-resolution images output... Calculation of CV distribution of raw peaks (QC)... CV<5% CV<10% CV<15% CV<20% CV<25% CV<30% CV<35% Batch_1 4.166667 43.75000 64.58333 75.00000 83.33333 91.66667 93.75000 Batch_2 18.750000 64.58333 79.16667 83.33333 93.75000 95.83333 95.83333 Batch_3 10.416667 43.75000 75.00000 81.25000 85.41667 91.66667 95.83333 Batch_4 6.250000 60.41667 75.00000 79.16667 91.66667 91.66667 93.75000 Total 0.000000 16.66667 35.41667 66.66667 68.75000 77.08333 79.16667 CV<40% CV<45% CV<50% CV<55% CV<60% CV<65% CV<70% CV<75% Batch_1 95.83333 97.91667 100.00000 100.00000 100.00000 100 100 100 Batch_2 95.83333 95.83333 97.91667 97.91667 97.91667 100 100 100 Batch_3 97.91667 100.00000 100.00000 100.00000 100.00000 100 100 100 Batch_4 100.00000 100.00000 100.00000 100.00000 100.00000 100 100 100 Total 79.16667 85.41667 89.58333 95.83333 100.00000 100 100 100 CV<80% CV<85% CV<90% CV<95% CV<100% Batch_1 100 100 100 100 100 Batch_2 100 100 100 100 100 Batch_3 100 100 100 100 100 Batch_4 100 100 100 100 100 Total 100 100 100 100 100 Calculation of CV distribution of corrected peaks (QC)... CV<5% CV<10% CV<15% CV<20% CV<25% CV<30% CV<35% Batch_1 4.166667 43.75000 68.75000 77.08333 89.58333 91.66667 95.83333 Batch_2 16.666667 54.16667 72.91667 83.33333 93.75000 95.83333 95.83333 Batch_3 4.166667 31.25000 68.75000 77.08333 81.25000 89.58333 95.83333 Batch_4 0.000000 39.58333 58.33333 70.83333 85.41667 93.75000 97.91667 Total 0.000000 33.33333 60.41667 81.25000 87.50000 95.83333 95.83333 CV<40% CV<45% CV<50% CV<55% CV<60% CV<65% CV<70% CV<75% Batch_1 95.83333 100.00000 100.00000 100.00000 100.00000 100 100 100 Batch_2 95.83333 95.83333 97.91667 97.91667 97.91667 100 100 100 Batch_3 97.91667 97.91667 97.91667 100.00000 100.00000 100 100 100 Batch_4 100.00000 100.00000 100.00000 100.00000 100.00000 100 100 100 Total 97.91667 100.00000 100.00000 100.00000 100.00000 100 100 100 CV<80% CV<85% CV<90% CV<95% CV<100% Batch_1 100 100 100 100 100 Batch_2 100 100 100 100 100 Batch_3 100 100 100 100 100 Batch_4 100 100 100 100 100 Total 100 100 100 100 100 Correction Finished! Time: Wed Oct 17 05:05:17 2018There were 49 warnings (use warnings() to see them) > > #test_check("statTarget") > > proc.time() user system elapsed 4.04 0.42 4.57 |
statTarget.Rcheck/tests_x64/testthat.Rout R version 3.5.1 Patched (2018-07-24 r75005) -- "Feather Spray" Copyright (C) 2018 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(statTarget) Use 'statTargetGUI()' to start the GUI program. For details see https://github.com/13479776/statTarget. > #library(statTarget) > datpath <- system.file("extdata",package = "statTarget") > samPeno <- paste(datpath,"MTBLS79_sampleList.csv", sep="/") > samFile <- paste(datpath,"MTBLS79.csv", sep="/") > file <- paste(datpath,"data_example_two_groups.csv", sep="/") > #statAnalysis(file, Frule = 0.8,imputeM = "KNN", glog = TRUE, test.multi=TRUE, nvarRF =10, scaling = "Pareto",silt = 500, pcax = 1, pcay = 2) > shiftCor(samPeno,samFile,Frule = 0.8,QCspan = 0.75, degree = 2,imputeM = "KNN") Data File Checking Start..., Time: Wed Oct 17 05:05:19 2018 172 Pheno Samples vs 172 Profile samples The Pheno samples list (*NA, missing data from the Profile File) [1] "batch01_QC01" "batch01_QC02" "batch01_QC03" "batch01_C05" "batch01_S07" [6] "batch01_C10" "batch01_QC04" "batch01_S01" "batch01_C03" "batch01_S05" [11] "batch01_C07" "batch01_S06" "batch01_QC05" "batch01_C08" "batch01_C06" [16] "batch01_S02" "batch01_S09" "batch01_QC06" "batch01_S04" "batch01_C04" [21] "batch01_S10" "batch01_C09" "batch01_QC07" "batch02_C05" "batch02_S03" [26] "batch02_S07" "batch02_C01" "batch02_C10" "batch02_QC08" "batch02_S01" [31] "batch02_C03" "batch02_S05" "batch02_C07" "batch02_S06" "batch02_QC09" [36] "batch02_C08" "batch02_C06" "batch02_S02" "batch02_S09" "batch02_C02" [41] "batch02_QC10" "batch02_S04" "batch02_S08" "batch02_C04" "batch02_S10" [46] "batch02_C09" "batch02_QC11" "batch03_C05" "batch03_S03" "batch03_S07" [51] "batch03_C01" "batch03_C10" "batch03_QC12" "batch03_S01" "batch03_C03" [56] "batch03_S05" "batch03_C07" "batch03_S06" "batch03_QC13" "batch03_C08" [61] "batch03_C06" "batch03_S02" "batch03_S09" "batch03_C02" "batch03_QC14" [66] "batch03_S04" "batch03_S08" "batch03_C04" "batch03_S10" "batch03_C09" [71] "batch03_QC15" "batch04_C05" "batch04_S03" "batch04_S07" "batch04_C01" [76] "batch04_QC16" "batch04_S01" "batch04_S05" "batch04_C07" "batch04_S06" [81] "batch04_QC17" "batch04_C08" "batch04_C06" "batch04_S02" "batch04_S09" [86] "batch04_C02" "batch04_QC18" "batch04_S08" "batch04_C04" "batch04_S10" [91] "batch04_QC19" "batch05_QC20" "batch05_S03" "batch05_S07" "batch05_C01" [96] "batch05_C10" "batch05_QC21" "batch05_S01" "batch05_C03" "batch05_C07" [101] "batch05_QC22" "batch05_C06" "batch05_C02" "batch05_QC23" "batch05_S04" [106] "batch05_S08" "batch05_C04" "batch05_QC24" "batch06_QC25" "batch06_S03" [111] "batch06_C10" "batch06_QC26" "batch06_S01" "batch06_C03" "batch06_S05" [116] "batch06_C07" "batch06_S06" "batch06_QC27" "batch06_C08" "batch06_C06" [121] "batch06_S02" "batch06_C02" "batch06_QC28" "batch06_S04" "batch06_S08" [126] "batch06_C04" "batch06_C09" "batch06_QC29" "batch07_QC30" "batch07_C05" [131] "batch07_S03" "batch07_S07" "batch07_C01" "batch07_C10" "batch07_QC31" [136] "batch07_C03" "batch07_S05" "batch07_C07" "batch07_S06" "batch07_QC32" [141] "batch07_C08" "batch07_S02" "batch07_S09" "batch07_C02" "batch07_QC33" [146] "batch07_S04" "batch07_S08" "batch07_S10" "batch07_C09" "batch07_QC34" [151] "batch08_C05" "batch08_S03" "batch08_S07" "batch08_C01" "batch08_C10" [156] "batch08_QC36" "batch08_S01" "batch08_C03" "batch08_S05" "batch08_C07" [161] "batch08_S06" "batch08_QC37" "batch08_C08" "batch08_S02" "batch08_S09" [166] "batch08_QC38" "batch08_S04" "batch08_S08" "batch08_C04" "batch08_S10" [171] "batch08_C09" "batch08_QC39" Phenotype information: Class No. 1 1 66 2 2 68 3 QC 38 Batch No. 1 1 91 2 2 17 3 3 20 4 4 44 Metabolic profile information: no. QC and samples 172 Metabolites 48 statTarget: shiftCor start...Time: Wed Oct 17 05:05:19 2018 Step 1: Evaluation of missing value... The number of NA value in Data Profile before QC-RLSC: 336 The number of variables including 80 % of missing value : 0 Step 2: Imputation start... The number of NA value in Data Profile after the initial imputation: 0 Imputation Finished! Step 3: QC-RLSC Start... Time: Wed Oct 17 05:05:19 2018 Warning: The QCspan was set at 0.75 | | | 0% | |= | 2% | |=== | 4% | |==== | 6% | |====== | 9% | |======= | 11% | |========= | 13% | |========== | 15% | |============ | 17% | |============= | 19% | |=============== | 21% | |================ | 23% | |================== | 26% | |=================== | 28% | |===================== | 30% | |====================== | 32% | |======================== | 34% | |========================= | 36% | |=========================== | 38% | |============================ | 40% | |============================== | 43% | |=============================== | 45% | |================================= | 47% | |================================== | 49% | |==================================== | 51% | |===================================== | 53% | |======================================= | 55% | |======================================== | 57% | |========================================== | 60% | |=========================================== | 62% | |============================================= | 64% | |============================================== | 66% | |================================================ | 68% | |================================================= | 70% | |=================================================== | 72% | |==================================================== | 74% | |====================================================== | 77% | |======================================================= | 79% | |========================================================= | 81% | |========================================================== | 83% | |============================================================ | 85% | |============================================================= | 87% | |=============================================================== | 89% | |================================================================ | 91% | |================================================================== | 94% | |=================================================================== | 96% | |===================================================================== | 98% | |======================================================================| 100% High-resolution images output... Calculation of CV distribution of raw peaks (QC)... CV<5% CV<10% CV<15% CV<20% CV<25% CV<30% CV<35% Batch_1 4.166667 43.75000 64.58333 75.00000 83.33333 91.66667 93.75000 Batch_2 18.750000 64.58333 79.16667 83.33333 93.75000 95.83333 95.83333 Batch_3 10.416667 43.75000 75.00000 81.25000 85.41667 91.66667 95.83333 Batch_4 6.250000 60.41667 75.00000 79.16667 91.66667 91.66667 93.75000 Total 0.000000 16.66667 35.41667 66.66667 68.75000 77.08333 79.16667 CV<40% CV<45% CV<50% CV<55% CV<60% CV<65% CV<70% CV<75% Batch_1 95.83333 97.91667 100.00000 100.00000 100.00000 100 100 100 Batch_2 95.83333 95.83333 97.91667 97.91667 97.91667 100 100 100 Batch_3 97.91667 100.00000 100.00000 100.00000 100.00000 100 100 100 Batch_4 100.00000 100.00000 100.00000 100.00000 100.00000 100 100 100 Total 79.16667 85.41667 89.58333 95.83333 100.00000 100 100 100 CV<80% CV<85% CV<90% CV<95% CV<100% Batch_1 100 100 100 100 100 Batch_2 100 100 100 100 100 Batch_3 100 100 100 100 100 Batch_4 100 100 100 100 100 Total 100 100 100 100 100 Calculation of CV distribution of corrected peaks (QC)... CV<5% CV<10% CV<15% CV<20% CV<25% CV<30% CV<35% Batch_1 4.166667 43.75000 68.75000 77.08333 89.58333 91.66667 95.83333 Batch_2 16.666667 54.16667 72.91667 83.33333 93.75000 95.83333 95.83333 Batch_3 4.166667 31.25000 68.75000 77.08333 81.25000 89.58333 95.83333 Batch_4 0.000000 39.58333 58.33333 70.83333 85.41667 93.75000 97.91667 Total 0.000000 33.33333 60.41667 81.25000 87.50000 95.83333 95.83333 CV<40% CV<45% CV<50% CV<55% CV<60% CV<65% CV<70% CV<75% Batch_1 95.83333 100.00000 100.00000 100.00000 100.00000 100 100 100 Batch_2 95.83333 95.83333 97.91667 97.91667 97.91667 100 100 100 Batch_3 97.91667 97.91667 97.91667 100.00000 100.00000 100 100 100 Batch_4 100.00000 100.00000 100.00000 100.00000 100.00000 100 100 100 Total 97.91667 100.00000 100.00000 100.00000 100.00000 100 100 100 CV<80% CV<85% CV<90% CV<95% CV<100% Batch_1 100 100 100 100 100 Batch_2 100 100 100 100 100 Batch_3 100 100 100 100 100 Batch_4 100 100 100 100 100 Total 100 100 100 100 100 Correction Finished! Time: Wed Oct 17 05:05:22 2018There were 49 warnings (use warnings() to see them) > > #test_check("statTarget") > > proc.time() user system elapsed 4.68 0.21 5.04 |
statTarget.Rcheck/examples_i386/statTarget-Ex.timings
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statTarget.Rcheck/examples_x64/statTarget-Ex.timings
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