Laurent Gatto
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/pRoloc |
| Branch: RELEASE_3_7 |
| Last Commit: dfbe646 |
| Last Changed Date: 2018-09-24 16:00:13 -0400 (Mon, 24 Sep 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:36:45 -0400 (Wed, 17 Oct 2018).
| Package 1133/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| pRoloc 1.20.2 Laurent Gatto
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: pRoloc |
| Version: 1.20.2 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/pRoloc_1.20.2.tar.gz && rm -rf pRoloc.buildbin-libdir && mkdir pRoloc.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pRoloc.buildbin-libdir pRoloc_1.20.2.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL pRoloc_1.20.2.zip && rm pRoloc_1.20.2.tar.gz pRoloc_1.20.2.zip |
| StartedAt: 2018-10-16 20:39:36 -0400 (Tue, 16 Oct 2018) |
| EndedAt: 2018-10-16 20:41:48 -0400 (Tue, 16 Oct 2018) |
| EllapsedTime: 132.2 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/pRoloc_1.20.2.tar.gz && rm -rf pRoloc.buildbin-libdir && mkdir pRoloc.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pRoloc.buildbin-libdir pRoloc_1.20.2.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL pRoloc_1.20.2.zip && rm pRoloc_1.20.2.tar.gz pRoloc_1.20.2.zip
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install for i386
* installing *source* package 'pRoloc' ...
** libs
C:/Rtools/mingw_32/bin/g++ -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.7-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.7-bioc/R/library/RcppArmadillo/include" -I"C:/extsoft/include" -O2 -Wall -mtune=generic -c pRoloc.cpp -o pRoloc.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o pRoloc.dll tmp.def pRoloc.o -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/i386 -lRlapack -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/i386 -lRblas -lgfortran -lm -lquadmath -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/pRoloc.buildbin-libdir/pRoloc/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'BiocGenerics::var' by 'stats::var' when loading 'MLInterfaces'
** help
*** installing help indices
converting help for package 'pRoloc'
finding HTML links ... done
AnnotationParams-class html
ClustDist-class html
ClustDistList-class html
GenRegRes-class html
finding level-2 HTML links ... done
MLearn-methods html
MartInstance-class html
QSep-class html
SpatProtVis-class html
addGoAnnotations html
addLegend html
addMarkers html
checkFeatureNamesOverlap html
checkFvarOverlap html
chi2-methods html
classWeights html
clustDist html
defunct html
empPvalues html
exprsToRatios-methods html
fDataToUnknown html
filterBinMSnSet html
filterMaxMarkers html
filterMinMarkers html
filterZeroCols html
getGOFromFeatures html
getMarkerClasses html
getMarkers html
getNormDist html
getPredictions html
getStockcol html
goIdToTerm html
highlightOnPlot html
knnClassification html
knnOptimisation html
knntlClassification html
knntlOptimisation html
ksvmClassification html
ksvmOptimisation html
lopims html
makeGoSet html
markerMSnSet html
markers html
minMarkers html
move2Ds html
mrkConsProfiles html
mrkHClust html
nbClassification html
nbOptimisation html
nndist-methods html
nnetClassification html
nnetOptimisation html
orderGoAnnotations html
orgQuants html
pRolocmarkers html
perTurboClassification html
perTurboOptimisation html
phenoDisco html
plot2D html
plot2Ds html
plotDist html
plsdaClassification html
plsdaOptimisation html
rfClassification html
rfOptimisation html
sampleMSnSet html
showGOEvidenceCodes html
subsetMarkers html
svmClassification html
svmOptimisation html
testMSnSet html
testMarkers html
thetas html
undocumented html
zerosInBinMSnSet html
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import 'BiocGenerics::var' by 'stats::var' when loading 'MLInterfaces'
In R CMD INSTALL
install for x64
* installing *source* package 'pRoloc' ...
** libs
C:/Rtools/mingw_64/bin/g++ -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.7-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.7-bioc/R/library/RcppArmadillo/include" -I"C:/extsoft/include" -O2 -Wall -mtune=generic -c pRoloc.cpp -o pRoloc.o
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o pRoloc.dll tmp.def pRoloc.o -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/x64 -lRlapack -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/pRoloc.buildbin-libdir/pRoloc/libs/x64
** testing if installed package can be loaded
Warning: replacing previous import 'BiocGenerics::var' by 'stats::var' when loading 'MLInterfaces'
* MD5 sums
packaged installation of 'pRoloc' as pRoloc_1.20.2.zip
* DONE (pRoloc)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'pRoloc' successfully unpacked and MD5 sums checked
In R CMD INSTALL