Back to Multiple platform build/check report for BioC 3.7 |
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This page was generated on 2018-10-17 08:44:01 -0400 (Wed, 17 Oct 2018).
Package 983/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
ndexr 1.2.0 Florian Auer
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: ndexr |
Version: 1.2.0 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/ndexr_1.2.0.tar.gz && rm -rf ndexr.buildbin-libdir && mkdir ndexr.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ndexr.buildbin-libdir ndexr_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL ndexr_1.2.0.zip && rm ndexr_1.2.0.tar.gz ndexr_1.2.0.zip |
StartedAt: 2018-10-16 18:51:16 -0400 (Tue, 16 Oct 2018) |
EndedAt: 2018-10-16 18:52:42 -0400 (Tue, 16 Oct 2018) |
EllapsedTime: 85.7 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/ndexr_1.2.0.tar.gz && rm -rf ndexr.buildbin-libdir && mkdir ndexr.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ndexr.buildbin-libdir ndexr_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL ndexr_1.2.0.zip && rm ndexr_1.2.0.tar.gz ndexr_1.2.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 116k 100 116k 0 0 1765k 0 --:--:-- --:--:-- --:--:-- 1972k install for i386 * installing *source* package 'ndexr' ... ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'ndexr' finding HTML links ... done listToRCode html ndex_conf_header html ndex_config html ndex_connect html ndex_create_group html ndex_create_network html ndex_create_user html ndex_delete_group html ndex_delete_network html ndex_delete_user html ndex_find_groups html ndex_find_networks html ndex_find_user_byId html ndex_find_user_byName html ndex_find_users html ndex_get_group html ndex_get_network html ndex_group_delete_membership html ndex_group_list_networks html ndex_group_list_users html ndex_group_network_get_permission html ndex_group_set_membership html ndex_helper_encodeParams html ndex_helper_getApi html ndex_helper_httpResponseHandler html ndex_internal_addAspects html ndex_network_aspect_get_metadata html ndex_network_delete_permission html ndex_network_get_aspect html ndex_network_get_metadata html ndex_network_get_permission html ndex_network_get_provenance html ndex_network_get_summary html ndex_network_set_systemProperties html ndex_network_update_aspect html ndex_network_update_permission html ndex_network_update_profile html ndex_rest_DELETE html ndex_rest_GET html ndex_rest_POST html ndex_rest_PUT html ndex_update_group html ndex_update_network html ndex_update_user html ndex_user_change_password html ndex_user_forgot_password html ndex_user_get_networksummary html ndex_user_get_showcase html ndex_user_list_groups html ndex_user_list_permissions html ndex_user_mail_password html ndex_user_show_group html ndex_user_show_permission html ndex_verify_user html ndexr-package html ngraph_toRCX html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpqGma5E/R.INSTALL15507db567fc/ndexr/man/ngraph_toRCX.Rd:153: file link 'igraph' in package 'igraph' does not exist and so has been treated as a topic print.NDExConnection html print.RCX html rcx_asNewNetwork html rcx_aspect_toJSON html rcx_fromJSON html rcx_new html rcx_toJSON html rcx_toNGraph html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpqGma5E/R.INSTALL15507db567fc/ndexr/man/rcx_toNGraph.Rd:27: file link 'igraph' in package 'igraph' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpqGma5E/R.INSTALL15507db567fc/ndexr/man/rcx_toNGraph.Rd:163: file link 'igraph' in package 'igraph' does not exist and so has been treated as a topic rcx_toRCXgraph html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpqGma5E/R.INSTALL15507db567fc/ndexr/man/rcx_toRCXgraph.Rd:31: file link 'igraph' in package 'igraph' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpqGma5E/R.INSTALL15507db567fc/ndexr/man/rcx_toRCXgraph.Rd:148: file link 'igraph' in package 'igraph' does not exist and so has been treated as a topic rcx_updateMetaData html rcxgraph_toRCX html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpqGma5E/R.INSTALL15507db567fc/ndexr/man/rcxgraph_toRCX.Rd:132: file link 'igraph' in package 'igraph' does not exist and so has been treated as a topic ** building package indices ** installing vignettes ** testing if installed package can be loaded In R CMD INSTALL install for x64 * installing *source* package 'ndexr' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'ndexr' as ndexr_1.2.0.zip * DONE (ndexr) In R CMD INSTALL In R CMD INSTALL * installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library' package 'ndexr' successfully unpacked and MD5 sums checked In R CMD INSTALL