'Raik Otto'
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/Uniquorn |
| Branch: RELEASE_3_7 |
| Last Commit: 8d58b71 |
| Last Changed Date: 2018-04-30 10:35:40 -0400 (Mon, 30 Apr 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:41:49 -0400 (Wed, 17 Oct 2018).
| Package 1527/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| Uniquorn 2.0.0 'Raik Otto'
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: Uniquorn |
| Version: 2.0.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/Uniquorn_2.0.0.tar.gz && rm -rf Uniquorn.buildbin-libdir && mkdir Uniquorn.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Uniquorn.buildbin-libdir Uniquorn_2.0.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL Uniquorn_2.0.0.zip && rm Uniquorn_2.0.0.tar.gz Uniquorn_2.0.0.zip |
| StartedAt: 2018-10-16 20:07:38 -0400 (Tue, 16 Oct 2018) |
| EndedAt: 2018-10-16 20:08:45 -0400 (Tue, 16 Oct 2018) |
| EllapsedTime: 67.5 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/Uniquorn_2.0.0.tar.gz && rm -rf Uniquorn.buildbin-libdir && mkdir Uniquorn.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Uniquorn.buildbin-libdir Uniquorn_2.0.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL Uniquorn_2.0.0.zip && rm Uniquorn_2.0.0.tar.gz Uniquorn_2.0.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 2342k 100 2342k 0 0 30.2M 0 --:--:-- --:--:-- --:--:-- 33.6M
install for i386
* installing *source* package 'Uniquorn' ...
** R
** inst
** byte-compile and prepare package for lazy loading
Note: possible error in 'create_bed_file(match_t, ': unused argument (manual_identifier_bed_file)
** help
*** installing help indices
converting help for package 'Uniquorn'
finding HTML links ... done
add_custom_vcf_to_database html
add_missing_cls html
add_p_q_values_statistics html
add_penality_statistics html
create_bed_file html
identify_vcf_file html
init_and_load_identification html
initiate_canonical_databases html
match_query_ccl_to_database html
parse_ccle_genotype_data html
parse_cosmic_genotype_data html
parse_vcf_file html
parse_vcf_query_into_db html
read_library_names html
read_mutation_grange_objects html
remove_ccls_from_database html
remove_library_from_database html
show_contained_ccls html
show_contained_variants_for_ccl html
show_contained_variants_in_library html
show_which_ccls_contain_variant html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'Uniquorn' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Uniquorn' as Uniquorn_2.0.0.zip
* DONE (Uniquorn)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'Uniquorn' successfully unpacked and MD5 sums checked
In R CMD INSTALL