Back to Multiple platform build/check report for BioC 3.7 |
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This page was generated on 2018-10-17 08:40:38 -0400 (Wed, 17 Oct 2018).
Package 1290/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
RTCGAToolbox 2.10.0 Marcel Ramos
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: RTCGAToolbox |
Version: 2.10.0 |
Command: rm -rf RTCGAToolbox.buildbin-libdir && mkdir RTCGAToolbox.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RTCGAToolbox.buildbin-libdir RTCGAToolbox_2.10.0.tar.gz |
StartedAt: 2018-10-17 06:55:59 -0400 (Wed, 17 Oct 2018) |
EndedAt: 2018-10-17 06:56:33 -0400 (Wed, 17 Oct 2018) |
EllapsedTime: 33.3 seconds |
RetCode: 0 |
Status: OK |
PackageFile: RTCGAToolbox_2.10.0.zip |
PackageFileSize: 3.307 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf RTCGAToolbox.buildbin-libdir && mkdir RTCGAToolbox.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RTCGAToolbox.buildbin-libdir RTCGAToolbox_2.10.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'RTCGAToolbox' ... ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'RTCGAToolbox' finding HTML links ... done CorResult-class html DGEResult-class html FirehoseCGHArray-class html FirehoseData-class html FirehoseGISTIC-class html FirehoseMethylationArray-class html FirehosemRNAArray-class html RTCGASample html RTCGAToolbox html biocExtract html finding level-2 HTML links ... done Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpkTMx6p/R.INSTALL2a1046756a19/RTCGAToolbox/man/biocExtract.Rd:32: file link 'RaggedExperiment' in package 'RaggedExperiment' does not exist and so has been treated as a topic getBroadSubtypes html getCNGECorrelation html getData html getDiffExpressedGenes html getFirehoseAnalyzeDates html getFirehoseData html getFirehoseDatasets html getFirehoseRunningDates html getGISTICPeaks html getMutationRate html getReport html getSurvival html hg19.ucsc.gene.locations html selectType html showResults-CorResult html showResults-DGEResult html showResults html ** building package indices ** installing vignettes ** testing if installed package can be loaded In R CMD INSTALL install for x64 * installing *source* package 'RTCGAToolbox' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'RTCGAToolbox' as RTCGAToolbox_2.10.0.zip * DONE (RTCGAToolbox) In R CMD INSTALL In R CMD INSTALL