Maurizio Pellegrino
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/Harshlight |
| Branch: RELEASE_3_7 |
| Last Commit: bffcf02 |
| Last Changed Date: 2018-04-30 10:35:05 -0400 (Mon, 30 Apr 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:21:46 -0400 (Wed, 17 Oct 2018).
| Package 673/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| Harshlight 1.52.0 Maurizio Pellegrino
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | [ OK ] | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: Harshlight |
| Version: 1.52.0 |
| Command: /home/biocbuild/bbs-3.7-bioc/R/bin/R CMD INSTALL Harshlight |
| StartedAt: 2018-10-15 18:09:44 -0400 (Mon, 15 Oct 2018) |
| EndedAt: 2018-10-15 18:09:53 -0400 (Mon, 15 Oct 2018) |
| EllapsedTime: 8.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### /home/biocbuild/bbs-3.7-bioc/R/bin/R CMD INSTALL Harshlight
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* installing to library ‘/home/biocbuild/bbs-3.7-bioc/R/library’
* installing *source* package ‘Harshlight’ ...
** libs
gcc -I"/home/biocbuild/bbs-3.7-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c Harshlight.c -o Harshlight.o
Harshlight.c: In function ‘extended_defects’:
Harshlight.c:564:20: warning: variable ‘p_num_points’ set but not used [-Wunused-but-set-variable]
int num_points, *p_num_points; //number of points inside the median kernel
^
Harshlight.c: In function ‘image_dilation’:
Harshlight.c:948:10: warning: variable ‘cell_value’ set but not used [-Wunused-but-set-variable]
double cell_value;
^
Harshlight.c: In function ‘norm’:
Harshlight.c:1316:27: warning: unused variable ‘sorted2’ [-Wunused-variable]
double *sorted; double *sorted2;
^
Harshlight.c: In function ‘report_overall_header’:
Harshlight.c:1471:6: warning: unknown conversion type character ‘)’ in format [-Wformat=]
PP "%d %d moveto (%.2f%) show\n", x_text_val, y_text - 215, *diff_br);
^
Harshlight.c:1474:6: warning: unknown conversion type character ‘)’ in format [-Wformat=]
PP "%d %d moveto (%.2f%) show\n", x_text_val, y_text - 230, *diff_dr);
^
Harshlight.c: In function ‘chip_summary’:
Harshlight.c:1532:6: warning: unknown conversion type character ‘)’ in format [-Wformat=]
PP "%d %d moveto (Extended defects: the variance of the Error Image explained by the background is %.2f%) show\n", x_text, y_text - 30, *var);
^
Harshlight.c:1542:6: warning: unknown conversion type character ‘)’ in format [-Wformat=]
PP "%d %d moveto (%.2f%) show\n", x_val_1, y_text - 100, *perc_c);
^
Harshlight.c:1543:6: warning: unknown conversion type character ‘)’ in format [-Wformat=]
PP "%d %d moveto (%.2f%) show\n", x_val_2, y_text - 100, *perc_d);
^
Harshlight.c: In function ‘extended_stop’:
Harshlight.c:1555:6: warning: unknown conversion type character ‘)’ in format [-Wformat=]
PP "%d %d moveto (Extended defects: the variance of the Error Image explained by the background is %.2f%) show\n", x_text, y_text - 30, *var);
^
gcc -shared -L/home/biocbuild/bbs-3.7-bioc/R/lib -L/usr/local/lib -o Harshlight.so Harshlight.o -L/home/biocbuild/bbs-3.7-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.7-bioc/R/library/Harshlight/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (Harshlight)