Hervé Pagès
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/HDF5Array |
| Branch: RELEASE_3_7 |
| Last Commit: 3c9aa23 |
| Last Changed Date: 2018-06-20 18:32:06 -0400 (Wed, 20 Jun 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:41:48 -0400 (Wed, 17 Oct 2018).
| Package 674/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| HDF5Array 1.8.1 Hervé Pagès
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: HDF5Array |
| Version: 1.8.1 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/HDF5Array_1.8.1.tar.gz && rm -rf HDF5Array.buildbin-libdir && mkdir HDF5Array.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HDF5Array.buildbin-libdir HDF5Array_1.8.1.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL HDF5Array_1.8.1.zip && rm HDF5Array_1.8.1.tar.gz HDF5Array_1.8.1.zip |
| StartedAt: 2018-10-16 18:54:03 -0400 (Tue, 16 Oct 2018) |
| EndedAt: 2018-10-16 18:54:37 -0400 (Tue, 16 Oct 2018) |
| EllapsedTime: 34.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/HDF5Array_1.8.1.tar.gz && rm -rf HDF5Array.buildbin-libdir && mkdir HDF5Array.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HDF5Array.buildbin-libdir HDF5Array_1.8.1.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL HDF5Array_1.8.1.zip && rm HDF5Array_1.8.1.tar.gz HDF5Array_1.8.1.zip
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install for i386
* installing *source* package 'HDF5Array' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'HDF5Array'
finding HTML links ... done
HDF5Array-class html
finding level-2 HTML links ... done
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpgpmgvT/R.INSTALLfd87eba7714/HDF5Array/man/HDF5Array-class.Rd:93: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
dump-management html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpgpmgvT/R.INSTALLfd87eba7714/HDF5Array/man/dump-management.Rd:104: file link 'type' in package 'DelayedArray' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpgpmgvT/R.INSTALLfd87eba7714/HDF5Array/man/dump-management.Rd:199: file link 'type' in package 'DelayedArray' does not exist and so has been treated as a topic
saveHDF5SummarizedExperiment html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpgpmgvT/R.INSTALLfd87eba7714/HDF5Array/man/saveHDF5SummarizedExperiment.Rd:11: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpgpmgvT/R.INSTALLfd87eba7714/HDF5Array/man/saveHDF5SummarizedExperiment.Rd:22: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpgpmgvT/R.INSTALLfd87eba7714/HDF5Array/man/saveHDF5SummarizedExperiment.Rd:26: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpgpmgvT/R.INSTALLfd87eba7714/HDF5Array/man/saveHDF5SummarizedExperiment.Rd:81: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpgpmgvT/R.INSTALLfd87eba7714/HDF5Array/man/saveHDF5SummarizedExperiment.Rd:92: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpgpmgvT/R.INSTALLfd87eba7714/HDF5Array/man/saveHDF5SummarizedExperiment.Rd:93: file link 'RangedSummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
writeHDF5Array html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpgpmgvT/R.INSTALLfd87eba7714/HDF5Array/man/writeHDF5Array.Rd:105: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
** building package indices
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'HDF5Array' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'HDF5Array' as HDF5Array_1.8.1.zip
* DONE (HDF5Array)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'HDF5Array' successfully unpacked and MD5 sums checked
In R CMD INSTALL