Multiple platform build/check report for BioC 3.6 experimental data

This page was generated on 2018-04-12 12:50:27 -0400 (Thu, 12 Apr 2018).

git log

Snapshot Date: 2018-04-12 07:35:06 -0400 (Thu, 12 Apr 2018)

Hostname	OS	Arch (*)	Platform label (**)	R version	Installed pkgs
*malbec1*	Linux (Ubuntu 16.04.1 LTS)	x86_64	x86_64-linux-gnu	3.4.4 (2018-03-15) -- "Someone to Lean On"	2000
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X (*) as reported by 'gcc -v'

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A ~~crossed-out~~ package name indicates the package is deprecated

SUMMARY

OS / Arch

INSTALL

BUILD

CHECK

BUILD BIN

malbec1

Linux (Ubuntu 16.04.1 LTS) / x86_64

0

0

21

305

0

1

325

0

0

74

251

ABAData 1.8.0

Steffi Grote

affycompData 1.16.0

Harris Jaffee

affydata 1.26.0

Harris Jaffee

Affyhgu133A2Expr 1.14.0

Zhicheng Ji

Affyhgu133aExpr 1.16.0

Zhicheng Ji

Affyhgu133Plus2Expr 1.12.0

Zhicheng Ji

AffymetrixDataTestFiles 0.16.0

Henrik Bengtsson

Affymoe4302Expr 1.16.0

Zhicheng Ji

airway 0.112.0

Michael Love

ALL 1.20.0

Robert Gentleman

ALLMLL 1.18.0

B. M. Bolstad

alpineData 1.4.0

Michael Love

AmpAffyExample 1.18.0

Rafael A. Irizarry

AneuFinderData 1.6.0

Aaron Taudt

antiProfilesData 1.14.0

Hector Corrada Bravo

aracne.networks 1.4.0

Federico M. Giorgi , Mariano Alvarez

ARRmData 1.14.0

Jean-Philippe Fortin

AshkenazimSonChr21 1.8.0

Who to complain to

bcellViper 1.14.0

Mariano Javier Alvarez

beadarrayExampleData 1.16.0

Mark Dunning

BeadArrayUseCases 1.16.0

Mike Smith

beta7 1.16.0

Jean Yang

biotmleData 1.2.0

Nima Hejazi

bladderbatch 1.16.0

Jeffrey T. Leek

blimaTestingData 0.112.0

Vojtech Kulvait

breastCancerMAINZ 1.16.0

Markus Schroeder , Benjamin Haibe-Kains

breastCancerNKI 1.16.0

Markus Schroeder , Benjamin Haibe-Kains

breastCancerTRANSBIG 1.16.0

Markus Schroeder , Benjamin Haibe-Kains

breastCancerUNT 1.16.0

Markus Schroeder , Benjamin Haibe-Kains

breastCancerUPP 1.16.0

Markus Schroeder , Benjamin Haibe-Kains

breastCancerVDX 1.16.0

Markus Schroeder , Benjamin Haibe-Kains

brgedata 1.1.6

Carlos Ruiz-Arenas

bronchialIL13 1.16.0

Vince Carey

bsseqData 0.16.0

Kasper Daniel Hansen

cancerdata 1.16.0

Daniel Kosztyla

CardinalWorkflows 1.10.0

Kylie A. Bemis

ccdata 1.4.0

Alex Pickering

CCl4 1.16.0

Audrey Kauffmann

ccTutorial 1.16.0

Joern Toedling

CellMapperData 1.4.0

Brad Nelms

ceu1kg 0.16.0

VJ Carey

ceu1kgv 0.20.0

VJ Carey

ceuhm3 0.16.0

VJ Carey

cgdv17 0.16.0

VJ Carey

ChAMPdata 2.10.0

Yuan Tian

charmData 1.14.0

Martin Aryee

cheung2010 0.16.1

Vince Carey

ChimpHumanBrainData 1.16.0

Sean Davis

chipenrich.data 2.2.0

Raymond G. Cavalcante

ChIPexoQualExample 1.2.0

Rene Welch

ChIPXpressData 1.16.0

George Wu

chromstaRData 1.4.0

Aaron Taudt

CLL 1.18.0

Robert Gentleman

cMap2data 1.14.0

J. Saez-Rodriguez

cnvGSAdata 1.14.0

Joseph Lugo

COHCAPanno 1.14.0

Charles Warden

colonCA 1.20.0

W Sylvia Merk

CONFESSdata 1.6.0

Diana LOW

ConnectivityMap 1.14.0

Paul Shannon

COPDSexualDimorphism.data 1.14.0

J Fah Sathirapongsasuti

CopyhelpeR 1.10.0

Thomas Kuilman

COSMIC.67 1.14.0

Julian Gehring

CRCL18 0.112.0

Claudio Isella

curatedBladderData 1.14.0

Markus Riester

curatedBreastData 2.6.0

Katie Planey

curatedCRCData 2.10.0

Princy Parsana

curatedMetagenomicData 1.8.1

Lucas Schiffer

curatedOvarianData 1.16.0

Levi Waldron

curatedTCGAData 1.0.3

Marcel Ramos

DAPARdata 1.8.0

Samuel Wieczorek

davidTiling 1.18.0

Wolfgang Huber

derfinderData 0.112.0

Leonardo Collado-Torres

DeSousa2013 1.14.0

Xin Wang

diffloopdata 1.6.0

Caleb Lareau

diggitdata 1.10.0

Mariano Javier Alvarez

DLBCL 1.18.0

Marcus Dittrich

DmelSGI 1.10.0

Bernd Fischer

DMRcatedata 1.14.0

Tim Peters

DonaPLLP2013 1.16.0

Joseph D. Barry

DREAM4 1.14.0

Paul Shannon

dressCheck 0.16.0

Vincent Carey

DrugVsDiseasedata 1.14.0

J. Saez-Rodriguez

dsQTL 0.16.0

VJ Carey

DvDdata 1.14.0

J. Saez-Rodriguez

dyebiasexamples 1.18.0

Philip Lijnzaad

EatonEtAlChIPseq 0.16.0

Patrick Aboyoun

ecoliLeucine 1.18.0

Laurent Gautier

EGSEAdata 1.6.0

Monther Alhamdoosh

ELMER.data 2.2.2

Tiago Chedraoui Silva

estrogen 1.24.0

Wolfgang Huber

etec16s 1.6.0

Joseph N. Paulson

faahKO 1.18.0

Colin A. Smith

fabiaData 1.16.0

Sepp Hochreiter

facopy.annot 0.112.0

David Mosen-Ansorena

facsDorit 1.20.0

Florian Hahne

FANTOM3and4CAGE 1.14.0

Vanja Haberle

ffpeExampleData 1.16.0

Levi Waldron

fibroEset 1.20.0

Sylvia Merk

FIs 1.6.0

Herbert Braselmann

fission 0.112.0

Michael Love

Fletcher2013a 1.14.0

Mauro Castro

Fletcher2013b 1.14.0

Mauro Castro

flowFitExampleData 1.14.0

Davide Rambaldi

flowPloidyData 1.4.0

Tyler Smith

flowQBData 1.4.0

Josef Spidlen

FlowSorted.Blood.450k 1.16.0

Andrew E Jaffe

FlowSorted.CordBlood.450k 1.6.0

Shan V. Andrews

FlowSorted.CordBloodNorway.450k 1.4.0

kristina gervin

FlowSorted.DLPFC.450k 1.14.0

Andrew E Jaffe

flowWorkspaceData 2.14.0

Mike Jiang

frmaExampleData 1.14.0

Matthew N. McCall

FunciSNP.data 1.14.0

Simon G. Coetzee

furrowSeg 1.6.0

Joseph Barry

gageData 2.16.0

Weijun Luo

gaschYHS 1.16.0

Vince Carey

gatingMLData 2.18.0

J. Spidlen

gcspikelite 1.16.0

Mark Robinson

geneLenDataBase 1.14.0

Nadia Davidson , Anthony Hawkins

genomationData 1.10.0

Vedran Franke

GeuvadisTranscriptExpr 1.6.0

Malgorzata Nowicka

geuvPack 1.10.0

VJ Carey

geuvStore2 1.8.0

VJ Carey

GGdata 1.16.0

VJ Carey

golubEsets 1.20.0

Vince Carey

grndata 1.10.0

Pau Bellot

GSBenchMark 0.112.0

Bahman Afsari

GSE62944 1.6.0

Bioconductor Package Maintainer

gskb 1.10.0

Valerie Bares

GSVAdata 1.14.0

Robert Castelo

GWASdata 1.16.0

Stephanie Gogarten , Adrienne Stilp

h5vcData 1.112.0

Paul Theodor Pyl

hapmap100khind 1.20.0

Benilton Carvalho

hapmap100kxba 1.20.0

Benilton Carvalho

hapmap500knsp 1.20.0

Benilton Carvalho

hapmap500ksty 1.20.0

Benilton Carvalho

hapmapsnp5 1.20.0

Benilton Carvalho

hapmapsnp6 1.20.0

Benilton Carvalho

harbChIP 1.16.0

VJ Carey

HarmanData 1.6.0

Jason Ross

HarmonizedTCGAData 1.0.0

Tianle Ma

HD2013SGI 1.18.0

Bernd Fischer

healthyFlowData 1.16.0

Ariful Azad

HEEBOdata 1.16.0

Agnes Paquet

HelloRangesData 1.4.0

Michael Lawrence

hgu133abarcodevecs 1.16.0

Matthew N. McCall

hgu133plus2barcodevecs 1.16.0

Matthew N. McCall

hgu2beta7 1.18.0

Bioconductor Package Maintainer

HiCDataHumanIMR90 0.112.0

Nicolas Servant

HiCDataLymphoblast 1.14.0

Borbala Mifsud

Hiiragi2013 1.14.1

Andrzej Oles

HIVcDNAvantWout03 1.18.0

Chris Fraley

hmyriB36 1.14.0

Vincent Carey

HSMMSingleCell 0.112.0

Cole Trapnell

HumanAffyData 1.4.0

Brad Nelms

humanStemCell 0.18.0

R. Gentleman

IHWpaper 1.6.0

Nikos Ignatiadis

Illumina450ProbeVariants.db 1.14.0

Tiffany Morris

IlluminaDataTestFiles 1.16.0

Kasper Daniel Hansen

iontreeData 1.14.0

Mingshu Cao

ITALICSData 2.16.0

Guillem Rigaill

Iyer517 1.20.0

Vince Carey

JASPAR2014 1.14.0

Ge Tan

JASPAR2016 1.6.0

Ge Tan

JctSeqData 1.8.0

Stephen Hartley

KEGGandMetacoreDzPathwaysGEO 0.112.0

Gaurav Bhatti

KEGGdzPathwaysGEO 1.16.0

Gaurav Bhatti

kidpack 1.20.0

Wolfgang Huber

KOdata 1.4.0

Shana White

leeBamViews 1.14.0

VJ Carey

leukemiasEset 1.14.0

Sara Aibar

LiebermanAidenHiC2009 0.16.0

Felix Klein

ListerEtAlBSseq 1.10.0

Kamal Kishore

lumiBarnes 1.18.0

Pan Du

LungCancerACvsSCCGEO 1.14.0

Adi Laurentiu Tarca

LungCancerLines 0.16.0

Cory Barr

lungExpression 0.16.0

Robert Scharpf

lydata 1.4.0

Alex Pickering

M3DExampleData 1.4.0

Tallulah Andrews

mammaPrintData 1.14.2

Luigi Marchionni

mAPKLData 1.10.0

Argiris Sakellariou

maqcExpression4plex 1.22.0

Benilton Carvalho

MAQCsubset 1.16.0

VJ Carey

MAQCsubsetAFX 1.16.0

Laurent Gatto

MAQCsubsetILM 1.16.0

Laurent Gatto

MEALData 1.8.0

Carlos Ruiz

MEDIPSData 1.14.0

Lukas Chavez

MEEBOdata 1.16.0

Agnes Paquet

metaMSdata 1.14.0

Ron Wehrens

MethylAidData 1.10.0

M. van Iterson

methyvimData 1.0.0

Nima Hejazi

microRNAome 1.0.0

Matthew N. McCall

MIGSAdata 1.2.0

Juan C. Rodriguez

minfiData 0.24.0

Kasper Daniel Hansen

minfiDataEPIC 1.4.0

Kasper Daniel Hansen

minionSummaryData 1.8.0

Mike Smith

miRcompData 1.8.0

Matthew N. McCall

miRNATarget 1.16.0

Y-h. Taguchi

mitoODEdata 1.14.0

Gregoire Pau

MMDiffBamSubset 1.14.0

Gabriele Schweikert

mosaicsExample 1.16.0

Dongjun Chung

mouse4302barcodevecs 1.16.0

Matthew N. McCall

MSBdata 0.16.0

Wolfgang Huber

msd16s 0.112.0

Joseph N. Paulson

msdata 0.18.0

Steffen Neumann , Laurent Gatto

msPurityData 1.6.0

Thomas N. Lawson

msqc1 1.6.0

Christian Panse

MSstatsBioData 1.0.0

Meena Choi

mtbls2 1.8.0

Steffen Neumann

MUGAExampleData 0.112.0

Daniel Gatti

Mulder2012 0.18.0

Xin Wang

mvoutData 1.14.0

VJ Carey

NCIgraphData 1.14.0

Laurent Jacob

Neve2006 0.16.0

VJ Carey

NGScopyData 0.112.0

Xiaobei Zhao

OnassisJavaLibs 1.0.0

Eugenia Galeota

parathyroidSE 1.16.0

Michael Love

pasilla 1.6.0

Alejandro Reyes

pasillaBamSubset 0.16.0

H. Pages

PasillaTranscriptExpr 1.6.0

Malgorzata Nowicka

PathNetData 1.14.0

Jason B. Smith

pathprintGEOData 1.4.0

Sokratis Kariotis

pcaGoPromoter.Hs.hg19 1.14.0

Morten Hansen

pcaGoPromoter.Mm.mm9 1.14.0

Morten Hansen

pcaGoPromoter.Rn.rn4 1.14.0

Morten Hansen,

PCHiCdata 1.6.0

Paula Freire-Pritchett

pcxnData 2.0.0

Sokratis Kariotis

pd.atdschip.tiling 0.16.0

Kristof De Beuf

pepDat 0.112.0

Renan Sauteraud

PGPC 1.6.0

Felix Klein

plasFIA 1.6.0

Alexis Delabriere

ppiData 0.16.0

Bioconductor Package Maintainer

prebsdata 1.14.0

Karolis Uziela

PREDAsampledata 0.18.0

Francesco Ferrari

ProData 1.16.0

Xiaochun Li

pRolocdata 1.16.0

Laurent Gatto

prostateCancerCamcap 1.6.0

Mark Dunning

prostateCancerGrasso 1.6.0

Mark Dunning

prostateCancerStockholm 1.6.0

Mark Dunning

prostateCancerTaylor 1.6.0

Mark Dunning

prostateCancerVarambally 1.6.0

Mark Dunning

PtH2O2lipids 1.4.0

James Collins

pumadata 2.14.0

Richard Pearson

PWMEnrich.Dmelanogaster.background 4.12.0

Robert Stojnic

PWMEnrich.Hsapiens.background 4.12.0

Robert Stojnic

PWMEnrich.Mmusculus.background 4.12.0

Robert Stojnic

QDNAseq.hg19 1.8.0

Daoud Sie

QDNAseq.mm10 1.8.0

Daoud Sie

QUBICdata 1.6.0

Yu Zhang

rcellminerData 2.0.0

Augustin Luna , Vinodh Rajapakse

restfulSEData 1.0.0

Bioconductor Package Maintainer

RforProteomics 1.16.0

Laurent Gatto

skipped

rheumaticConditionWOLLBOLD 1.16.0

Alejandro Quiroz-Zarate

RIPSeekerData 1.14.0

Alejandro Reyes

RITANdata 1.2.0

Michael Zimmermann

RMassBankData 1.16.0

Michael Stravs, Emma Schymanski

RNAinteractMAPK 1.16.0

Bernd Fischer

RNAseqData.HNRNPC.bam.chr14 0.16.0

H. Pages

RnaSeqSampleSizeData 1.10.0

Shilin Zhao

RnaSeqTutorial 0.16.0

Nicolas Delhomme

RnBeads.hg19 1.10.0

RnBeadsAnnotationCreator

RnBeads.hg38 1.10.0

RnBeadsAnnotationCreator

RnBeads.mm10 1.10.0

RnBeadsAnnotationCreator

RnBeads.mm9 1.10.0

RnBeadsAnnotationCreator

RnBeads.rn5 1.10.0

RnBeadsAnnotationCreator

RRBSdata 0.112.0

Katja Hebestreit

rRDPData 0.112.0

Michael Hahsler

RTCGA.clinical 20151101.8.0

Marcin Kosinski

RTCGA.CNV 1.6.0

Marcin Kosinski

RTCGA.methylation 1.6.0

Marcin Kosinski

RTCGA.miRNASeq 1.6.0

Marcin Kosinski

RTCGA.mRNA 1.6.0

Marcin Kosinski

RTCGA.mutations 20151101.8.0

Marcin Kosinski

RTCGA.PANCAN12 1.6.0

Marcin Kosinski

RTCGA.rnaseq 20151101.8.0

Marcin Kosinski

RTCGA.RPPA 1.6.0

Marcin Kosinski

RUVnormalizeData 0.112.0

Laurent Jacob

sampleClassifierData 1.2.0

Khadija El Amrani

SCLCBam 1.10.0

Thomas Kuilman

scRNAseq 1.4.0

Davide Risso

seq2pathway.data 1.10.0

Xinan Holly Yang

seqc 1.12.0

Yang Liao and Wei Shi

seqCNA.annot 1.14.0

David Mosen-Ansorena

serumStimulation 1.14.0

Morten Hansen,

seventyGeneData 1.14.0

Luigi Marchionni

shinyMethylData 0.112.0

Jean-Philippe Fortin

simpIntLists 1.14.0

Kircicegi Korkmaz

Single.mTEC.Transcriptomes 1.6.0

Alejandro Reyes

SNAData 1.24.0

Denise Scholtens

SNAGEEdata 1.14.0

David Venet

SNPhoodData 1.8.0

Christian Arnold

SomatiCAData 1.16.0

Mengjie Chen

SomaticCancerAlterations 1.14.0

Julian Gehring

SpikeIn 1.20.0

Rafael A. Irizarry

SpikeInSubset 1.18.0

Rafael A. Irizarry

stemHypoxia 1.14.0

Cristobal Fresno

stjudem 1.18.0

Joern Toedling

SVM2CRMdata 1.10.0

Guidantonio Malagoli Tagliazucchi

synapterdata 1.16.0

Laurent Gatto

systemPipeRdata 1.6.0

Thomas Girke

TargetScoreData 1.14.0

Yue Li

TargetSearchData 1.16.0

Alvaro Cuadros-Inostroza

TBX20BamSubset 1.14.0

D. Bindreither

TCGAcrcmiRNA 0.112.0

Claudio Isella

TCGAcrcmRNA 0.112.0

Claudio Isella

TCGAMethylation450k 1.14.0

Sean Davis

TCGAWorkflowData 1.2.1

Tiago Chedraoui Silva

TimerQuant 1.8.0

Joseph Barry

tinesath1cdf 1.16.0

Tine Casneuf

tinesath1probe 1.16.0

Tine Casneuf

tofsimsData 1.6.0

Lorenz Gerber

topdownrdata 1.0.0

Sebastian Gibb

tweeDEseqCountData 1.16.0

Juan R Gonzalez

tximportData 1.6.0

Michael Love

VariantToolsData 1.2.0

Michael Lawrence

vulcandata 1.0.0

Federico M. Giorgi

waveTilingData 1.14.0

Kristof De Beuf

WES.1KG.WUGSC 1.10.0

Yuchao Jiang

XhybCasneuf 1.16.0

Tineke Casneuf

yeastCC 1.18.0

Sandrine Dudoit

yeastExpData 0.24.0

R. Gentleman

yeastGSData 0.16.0

R. Gentleman

yeastNagalakshmi 1.14.0

Bioconductor Package Maintainer

yeastRNASeq 0.16.0

J. Bullard

yri1kgv 0.20.0

VJ Carey

yriMulti 0.8.0

VJ Carey

zebrafishRNASeq 0.112.0

Davide Risso