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BioC 3.5: INSTALL report for S4Vectors on malbec2

This page was generated on 2017-10-18 14:15:53 -0400 (Wed, 18 Oct 2017).

Package 1170/1381HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
S4Vectors 0.14.7
Bioconductor Package Maintainer
Snapshot Date: 2017-10-17 17:00:52 -0400 (Tue, 17 Oct 2017)
URL: https://git.bioconductor.org/packages/S4Vectors
Branch: RELEASE_3_5
Last Commit: c00fffd
Last Changed Date: 2017-10-06 22:04:46 -0400 (Fri, 06 Oct 2017)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64 [ OK ] OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  ERROR  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
veracruz2 OS X 10.11.6 El Capitan / x86_64  ERROR  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: S4Vectors
Version: 0.14.7
Command: /home/biocbuild/bbs-3.5-bioc/R/bin/R CMD INSTALL S4Vectors
StartedAt: 2017-10-17 17:59:01 -0400 (Tue, 17 Oct 2017)
EndedAt: 2017-10-17 17:59:06 -0400 (Tue, 17 Oct 2017)
EllapsedTime: 5.1 seconds
RetCode: 0
Status:  OK 

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.5-bioc/R/bin/R CMD INSTALL S4Vectors
###
##############################################################################
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* installing to library ‘/home/biocbuild/bbs-3.5-bioc/R/library’
* installing *source* package ‘S4Vectors’ ...
** libs
make: Nothing to be done for 'all'.
installing to /home/biocbuild/bbs-3.5-bioc/R/library/S4Vectors/libs
** R
** inst
** preparing package for lazy loading
Creating a generic function for ‘complete.cases’ from package ‘stats’ in package ‘S4Vectors’
Creating a new generic function for ‘expand.grid’ in package ‘S4Vectors’
Creating a generic function for ‘%in%’ from package ‘base’ in package ‘S4Vectors’
Creating a new generic function for ‘findMatches’ in package ‘S4Vectors’
Creating a generic function for ‘setequal’ from package ‘base’ in package ‘S4Vectors’
Creating a generic function for ‘as.factor’ from package ‘base’ in package ‘S4Vectors’
Creating a generic function for ‘tabulate’ from package ‘base’ in package ‘S4Vectors’
Creating a generic function for ‘cov’ from package ‘stats’ in package ‘S4Vectors’
Creating a generic function for ‘cor’ from package ‘stats’ in package ‘S4Vectors’
Creating a generic function for ‘smoothEnds’ from package ‘stats’ in package ‘S4Vectors’
Creating a generic function for ‘runmed’ from package ‘stats’ in package ‘S4Vectors’
Creating a generic function for ‘nchar’ from package ‘base’ in package ‘S4Vectors’
Creating a generic function for ‘substr’ from package ‘base’ in package ‘S4Vectors’
Creating a generic function for ‘substring’ from package ‘base’ in package ‘S4Vectors’
Creating a generic function for ‘chartr’ from package ‘base’ in package ‘S4Vectors’
Creating a generic function for ‘tolower’ from package ‘base’ in package ‘S4Vectors’
Creating a generic function for ‘toupper’ from package ‘base’ in package ‘S4Vectors’
Creating a generic function for ‘sub’ from package ‘base’ in package ‘S4Vectors’
Creating a generic function for ‘gsub’ from package ‘base’ in package ‘S4Vectors’
in method for ‘coerce’ with signature ‘"data.table","DataFrame"’: no definition for class “data.table”
** help
*** installing help indices
** building package indices
** installing vignettes
   ‘RleTricks.Rnw’ using ‘UTF-8’ 
   ‘S4QuickOverview.Rnw’ using ‘UTF-8’ 
** testing if installed package can be loaded
* DONE (S4Vectors)