MSnbase 1.19.2
Laurent Gatto
| Snapshot Date: 2015-10-26 20:20:04 -0400 (Mon, 26 Oct 2015) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/MSnbase | | Last Changed Rev: 109891 / Revision: 109948 | | Last Changed Date: 2015-10-24 18:09:21 -0400 (Sat, 24 Oct 2015) |
| linux2.bioconductor.org | Linux (Ubuntu 14.04.2 LTS) / x86_64 | OK | OK | OK | |  |
| windows2.bioconductor.org | Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64 | [ OK ] | OK | OK | OK | |
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### Running command:
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### C:\cygwin64\bin\curl.exe -O http://linux2.bioconductor.org/BBS/3.3/bioc/src/contrib/MSnbase_1.19.2.tar.gz && c:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch MSnbase_1.19.2.tar.gz && rm MSnbase_1.19.2.tar.gz
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install for i386
* installing to library 'c:/biocbld/bbs-3.3-bioc/R/library'
* installing *source* package 'MSnbase' ...
** libs
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c imp_neighbour_avg.cpp -o imp_neighbour_avg.o
g++ -m32 -shared -s -static-libgcc -o MSnbase.dll tmp.def RcppExports.o imp_neighbour_avg.o -Ld:/RCompile/r-compiling/local/local320/lib/i386 -Ld:/RCompile/r-compiling/local/local320/lib -Lc:/biocbld/BBS-3˜1.3-B/R/bin/i386 -lR
installing to c:/biocbld/bbs-3.3-bioc/R/library/MSnbase/libs/i386
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
Creating a new generic function for 'smooth' in package 'MSnbase'
Creating a generic function for 't' from package 'base' in package 'MSnbase'
Creating a generic function for 'scale' from package 'base' in package 'MSnbase'
in method for 'coerce' with signature '"IBSpectra","MSnSet"': no definition for class "IBSpectra"
Creating a generic function for 'split' from package 'base' in package 'MSnbase'
** help
*** installing help indices
** building package indices
** installing vignettes
'MSnbase-demo.Rnw'
'MSnbase-development.Rnw'
'MSnbase-io.Rnw'
** testing if installed package can be loaded
install for x64
* installing to library 'c:/biocbld/bbs-3.3-bioc/R/library'
* installing *source* package 'MSnbase' ...
** libs
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c imp_neighbour_avg.cpp -o imp_neighbour_avg.o
g++ -m64 -shared -s -static-libgcc -o MSnbase.dll tmp.def RcppExports.o imp_neighbour_avg.o -Ld:/RCompile/r-compiling/local/local320/lib/x64 -Ld:/RCompile/r-compiling/local/local320/lib -Lc:/biocbld/BBS-3˜1.3-B/R/bin/x64 -lR
installing to c:/biocbld/bbs-3.3-bioc/R/library/MSnbase/libs/x64
** testing if installed package can be loaded
* DONE (MSnbase)