Britta Velten
| Snapshot Date: 2026-03-05 13:40 -0500 (Thu, 05 Mar 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-03-06 11:35 -0500 (Fri, 06 Mar 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2026-01-15 r89304) -- "Unsuffered Consequences" | 4891 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2026-01-15 r89304) -- "Unsuffered Consequences" | 4593 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 926/2357 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz |
| StartedAt: 2026-03-05 20:12:32 -0500 (Thu, 05 Mar 2026) |
| EndedAt: 2026-03-05 20:13:04 -0500 (Thu, 05 Mar 2026) |
| EllapsedTime: 31.3 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2026-01-15 r89304)
* using platform: aarch64-apple-darwin20
* R was compiled by
Apple clang version 16.0.0 (clang-1600.0.26.6)
GNU Fortran (GCC) 14.2.0
* running under: macOS Sonoma 14.8.3
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’
* used SDK: ‘MacOSX11.3.1.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’ using SDK: ‘MacOSX11.3.1.sdk’ clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2026-01-15 r89304) -- "Unsuffered Consequences"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-864.469
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-590.371
ELB improved by 274.098
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-533.4
ELB improved by 56.9707
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-490.855
ELB improved by 42.5453
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.118
ELB improved by 19.7368
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.071
ELB improved by 7.04622
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.045
ELB improved by 4.02598
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.641
ELB improved by 3.40424
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.258
ELB improved by 3.38367
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.703
ELB improved by 3.55498
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.927
ELB improved by 3.77553
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.04
ELB improved by 3.88742
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.325
ELB improved by 3.71508
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.109
ELB improved by 3.21547
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.579
ELB improved by 2.53007
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.736
ELB improved by 1.84278
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.451
ELB improved by 1.28503
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.546
ELB improved by 0.904851
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.87
ELB improved by 0.676812
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.326
ELB improved by 0.543894
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.877
ELB improved by 0.448704
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.514
ELB improved by 0.362676
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.223
ELB improved by 0.291069
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.983
ELB improved by 0.239926
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.779
ELB improved by 0.204422
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.601
ELB improved by 0.178317
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.443
ELB improved by 0.157884
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.301
ELB improved by 0.141213
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.174
ELB improved by 0.127254
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.059
ELB improved by 0.115356
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.954
ELB improved by 0.105074
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.858
ELB improved by 0.0960882
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.769
ELB improved by 0.0881602
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.688
ELB improved by 0.081109
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.614
ELB improved by 0.0747948
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.544
ELB improved by 0.0691085
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.481
ELB improved by 0.0639635
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.421
ELB improved by 0.0592902
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.366
ELB improved by 0.0550318
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.315
ELB improved by 0.0511416
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.267
ELB improved by 0.0475805
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.223
ELB improved by 0.0443152
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.182
ELB improved by 0.0413175
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.143
ELB improved by 0.0385626
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.107
ELB improved by 0.0360291
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.074
ELB improved by 0.0336979
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.042
ELB improved by 0.0315522
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.012
ELB improved by 0.0295771
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.985
ELB improved by 0.0277593
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.959
ELB improved by 0.0260868
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.934
ELB improved by 0.0245492
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.911
ELB improved by 0.0231374
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.889
ELB improved by 0.0218434
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.868
ELB improved by 0.0206605
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.849
ELB improved by 0.0195838
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.83
ELB improved by 0.0186095
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.812
ELB improved by 0.0177359
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.795
ELB improved by 0.0169636
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.779
ELB improved by 0.0162961
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.763
ELB improved by 0.0157408
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.748
ELB improved by 0.0153105
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.733
ELB improved by 0.0150258
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.718
ELB improved by 0.0149172
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.703
ELB improved by 0.0150299
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.688
ELB improved by 0.0154278
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.672
ELB improved by 0.0161966
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.654
ELB improved by 0.0174417
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.635
ELB improved by 0.0192691
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.613
ELB improved by 0.0217336
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.588
ELB improved by 0.0247395
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.56
ELB improved by 0.0279199
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.53
ELB improved by 0.0306076
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.498
ELB improved by 0.0320596
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.466
ELB improved by 0.031889
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.436
ELB improved by 0.030321
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.408
ELB improved by 0.0279832
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.382
ELB improved by 0.0254819
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.359
ELB improved by 0.0231699
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.338
ELB improved by 0.0211682
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.318
ELB improved by 0.019476
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.3
ELB improved by 0.0180523
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.283
ELB improved by 0.0168536
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.268
ELB improved by 0.0158444
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.253
ELB improved by 0.0149984
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.238
ELB improved by 0.014296
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.225
ELB improved by 0.0137229
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.211
ELB improved by 0.0132684
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.198
ELB improved by 0.0129252
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.186
ELB improved by 0.0126881
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.173
ELB improved by 0.0125541
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.161
ELB improved by 0.0125216
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.148
ELB improved by 0.0125899
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.135
ELB improved by 0.012758
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.122
ELB improved by 0.0130233
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.109
ELB improved by 0.0133797
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.095
ELB improved by 0.0138154
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.081
ELB improved by 0.0143116
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.066
ELB improved by 0.0148409
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.05
ELB improved by 0.0153695
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.035
ELB improved by 0.0158603
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.018
ELB improved by 0.0162804
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.002
ELB improved by 0.016608
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.985
ELB improved by 0.0168388
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.968
ELB improved by 0.0169864
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.951
ELB improved by 0.0170794
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.934
ELB improved by 0.017154
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.916
ELB improved by 0.0172475
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.899
ELB improved by 0.017393
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.881
ELB improved by 0.0176186
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.863
ELB improved by 0.0179483
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.845
ELB improved by 0.0184044
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.826
ELB improved by 0.019012
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.806
ELB improved by 0.0198025
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.785
ELB improved by 0.0208198
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.763
ELB improved by 0.0221268
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.739
ELB improved by 0.0238163
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.713
ELB improved by 0.0260248
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.684
ELB improved by 0.0289516
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.652
ELB improved by 0.0328769
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.613
ELB improved by 0.0381593
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.568
ELB improved by 0.0451586
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.514
ELB improved by 0.0539901
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.45
ELB improved by 0.0640659
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.376
ELB improved by 0.0737581
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.295
ELB improved by 0.0810133
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.21
ELB improved by 0.0849788
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.124
ELB improved by 0.086712
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.036
ELB improved by 0.0878793
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.947
ELB improved by 0.0893488
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.855
ELB improved by 0.0910892
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.763
ELB improved by 0.0926874
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.669
ELB improved by 0.0937155
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.575
ELB improved by 0.0938522
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.482
ELB improved by 0.0928959
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.392
ELB improved by 0.0907538
iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.304
ELB improved by 0.087431
iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.221
ELB improved by 0.0830205
iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.143
ELB improved by 0.0776899
iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.072
ELB improved by 0.0716614
iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.007
ELB improved by 0.0651885
iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.948
ELB improved by 0.0585296
iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.896
ELB improved by 0.0519242
iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.851
ELB improved by 0.0455744
iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.811
ELB improved by 0.0396337
iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.777
ELB improved by 0.0342037
iteration 146
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.747
ELB improved by 0.0293376
iteration 147
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.722
ELB improved by 0.0250479
iteration 148
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.701
ELB improved by 0.0213169
iteration 149
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.683
ELB improved by 0.0181061
iteration 150
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.668
ELB improved by 0.0153655
iteration 151
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.654
ELB improved by 0.0130404
iteration 152
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.643
ELB improved by 0.0110764
iteration 153
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.634
ELB improved by 0.00942233
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-884.158
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-576.734
ELB improved by 307.424
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-521.403
ELB improved by 55.3311
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-491.765
ELB improved by 29.6376
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-478.248
ELB improved by 13.5173
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.722
ELB improved by 7.52613
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.805
ELB improved by 4.9166
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.937
ELB improved by 3.86765
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.559
ELB improved by 3.37809
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.535
ELB improved by 3.02471
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.854
ELB improved by 2.68076
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.54
ELB improved by 2.31385
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.612
ELB improved by 1.92838
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.062
ELB improved by 1.54997
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.85
ELB improved by 1.21168
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.913
ELB improved by 0.936527
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.184
ELB improved by 0.72932
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.603
ELB improved by 0.580915
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.127
ELB improved by 0.476285
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.727
ELB improved by 0.400182
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.386
ELB improved by 0.340321
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.097
ELB improved by 0.289283
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.853
ELB improved by 0.244489
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.647
ELB improved by 0.20599
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.473
ELB improved by 0.174072
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.324
ELB improved by 0.148316
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.197
ELB improved by 0.127759
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.085
ELB improved by 0.111301
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.987
ELB improved by 0.0979689
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.9
ELB improved by 0.0870002
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.822
ELB improved by 0.0778314
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.752
ELB improved by 0.070056
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.689
ELB improved by 0.0633808
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.631
ELB improved by 0.0575908
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.579
ELB improved by 0.0525253
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.531
ELB improved by 0.0480611
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.487
ELB improved by 0.0441019
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.446
ELB improved by 0.0405711
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.409
ELB improved by 0.0374067
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.374
ELB improved by 0.0345579
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.342
ELB improved by 0.0319829
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.313
ELB improved by 0.0296471
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.285
ELB improved by 0.0275213
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.259
ELB improved by 0.0255814
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.236
ELB improved by 0.0238067
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.213
ELB improved by 0.0221799
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.193
ELB improved by 0.0206861
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.173
ELB improved by 0.0193123
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.155
ELB improved by 0.0180475
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.139
ELB improved by 0.0168817
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.123
ELB improved by 0.0158064
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.108
ELB improved by 0.0148136
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.094
ELB improved by 0.0138964
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.081
ELB improved by 0.0130485
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.069
ELB improved by 0.012264
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.057
ELB improved by 0.0115377
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.046
ELB improved by 0.0108647
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.036
ELB improved by 0.0102407
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.026
ELB improved by 0.00966165
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-866.154
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-592.763
ELB improved by 273.391
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-535.462
ELB improved by 57.3006
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-494.011
ELB improved by 41.4518
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.998
ELB improved by 22.0129
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.374
ELB improved by 10.6239
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.608
ELB improved by 5.76583
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.343
ELB improved by 4.26493
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.533
ELB improved by 3.8102
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.845
ELB improved by 3.68751
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.136
ELB improved by 3.70959
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.377
ELB improved by 3.75874
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.694
ELB improved by 3.68284
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.35
ELB improved by 3.34373
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.5
ELB improved by 2.85021
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.018
ELB improved by 2.48175
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.871
ELB improved by 2.14744
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.33
ELB improved by 1.54069
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.371
ELB improved by 0.959351
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.75
ELB improved by 0.621197
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.301
ELB improved by 0.449163
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.944
ELB improved by 0.356719
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.643
ELB improved by 0.300622
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.381
ELB improved by 0.262427
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.146
ELB improved by 0.23441
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.933
ELB improved by 0.213123
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.737
ELB improved by 0.196802
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.552
ELB improved by 0.184394
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.377
ELB improved by 0.175198
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.208
ELB improved by 0.168723
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.044
ELB improved by 0.164616
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.881
ELB improved by 0.162632
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.718
ELB improved by 0.162604
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.554
ELB improved by 0.164431
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.386
ELB improved by 0.168069
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.212
ELB improved by 0.17353
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.031
ELB improved by 0.180885
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.841
ELB improved by 0.190283
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.639
ELB improved by 0.201975
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.423
ELB improved by 0.216355
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.189
ELB improved by 0.234012
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.933
ELB improved by 0.255802
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.65
ELB improved by 0.282904
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.333
ELB improved by 0.316819
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.974
ELB improved by 0.359178
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.563
ELB improved by 0.411087
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.091
ELB improved by 0.471725
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.555
ELB improved by 0.536373
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.96
ELB improved by 0.595308
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.324
ELB improved by 0.63593
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.675
ELB improved by 0.648193
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.046
ELB improved by 0.629625
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.46
ELB improved by 0.586259
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.931
ELB improved by 0.528648
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.466
ELB improved by 0.464686
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.071
ELB improved by 0.395487
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.749
ELB improved by 0.32155
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.499
ELB improved by 0.250468
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.308
ELB improved by 0.190461
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.165
ELB improved by 0.142881
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.06
ELB improved by 0.105489
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.983
ELB improved by 0.0765365
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.928
ELB improved by 0.0549766
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.889
ELB improved by 0.0396217
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.86
ELB improved by 0.0290156
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.838
ELB improved by 0.0217591
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.821
ELB improved by 0.0167523
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.808
ELB improved by 0.0132328
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.797
ELB improved by 0.0107038
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.788
ELB improved by 0.00884809
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-863.484
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-551.698
ELB improved by 311.786
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-489.019
ELB improved by 62.6791
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.844
ELB improved by 34.1747
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.921
ELB improved by 11.9235
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.104
ELB improved by 4.81612
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.058
ELB improved by 3.04674
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.588
ELB improved by 2.46963
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.28
ELB improved by 2.30774
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.947
ELB improved by 2.33382
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.478
ELB improved by 2.46853
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.794
ELB improved by 2.68367
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.833
ELB improved by 2.96115
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.576
ELB improved by 3.25674
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.114
ELB improved by 3.46208
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.706
ELB improved by 3.40852
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.72
ELB improved by 2.98613
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.411
ELB improved by 2.30879
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.765
ELB improved by 1.64611
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.587
ELB improved by 1.17808
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.668
ELB improved by 0.918583
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.864
ELB improved by 0.804326
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.088
ELB improved by 0.775695
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.29
ELB improved by 0.79823
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.436
ELB improved by 0.853686
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.511
ELB improved by 0.925338
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.515
ELB improved by 0.995887
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.453
ELB improved by 1.06204
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.323
ELB improved by 1.13014
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.127
ELB improved by 1.19603
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.884
ELB improved by 1.24301
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.63
ELB improved by 1.2536
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.402
ELB improved by 1.22865
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.182
ELB improved by 1.21946
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.848
ELB improved by 1.33432
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.415
ELB improved by 1.4325
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.22
ELB improved by 1.19556
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.346
ELB improved by 0.873247
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.728
ELB improved by 0.618115
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.289
ELB improved by 0.439032
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.969
ELB improved by 0.320609
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.728
ELB improved by 0.24103
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.543
ELB improved by 0.1844
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.401
ELB improved by 0.142293
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.29
ELB improved by 0.110617
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.203
ELB improved by 0.0869464
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.134
ELB improved by 0.06941
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.078
ELB improved by 0.0564479
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.031
ELB improved by 0.0468068
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.991
ELB improved by 0.039533
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.957
ELB improved by 0.0339348
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.928
ELB improved by 0.0295275
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.902
ELB improved by 0.0259781
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.879
ELB improved by 0.0230594
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.858
ELB improved by 0.0206164
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.84
ELB improved by 0.0185418
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.823
ELB improved by 0.01676
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.808
ELB improved by 0.0152165
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.794
ELB improved by 0.0138707
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.781
ELB improved by 0.0126915
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.769
ELB improved by 0.0116542
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.759
ELB improved by 0.0107385
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.749
ELB improved by 0.00992772
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
1.133 0.090 1.245
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.012 | 0.006 | 0.018 | |
| getPIPs | 0.010 | 0.005 | 0.015 | |
| graper | 0.019 | 0.007 | 0.029 | |
| makeExampleData | 0.002 | 0.000 | 0.002 | |
| makeExampleDataWithUnequalGroups | 0.002 | 0.000 | 0.003 | |
| plotELBO | 0.117 | 0.009 | 0.140 | |
| plotGroupPenalties | 0.360 | 0.007 | 0.384 | |
| plotPosterior | 0.331 | 0.013 | 0.362 | |
| predict.graper | 0.223 | 0.026 | 0.258 | |
| print.graper | 0.011 | 0.004 | 0.014 | |