Back to Multiple platform build/check report for BioC 3.20:   simplified   long
ABCDEF[G]HIJKLMNOPQRSTUVWXYZ

This page was generated on 2024-12-19 12:03 -0500 (Thu, 19 Dec 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.1 LTS)x86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4743
palomino8Windows Server 2022 Datacenterx644.4.2 (2024-10-31 ucrt) -- "Pile of Leaves" 4486
merida1macOS 12.7.5 Montereyx86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4514
kjohnson1macOS 13.6.6 Venturaarm644.4.2 (2024-10-31) -- "Pile of Leaves" 4466
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 899/2289HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
graper 1.22.0  (landing page)
Britta Velten
Snapshot Date: 2024-12-16 13:00 -0500 (Mon, 16 Dec 2024)
git_url: https://git.bioconductor.org/packages/graper
git_branch: RELEASE_3_20
git_last_commit: 04d5a90
git_last_commit_date: 2024-10-29 10:33:50 -0500 (Tue, 29 Oct 2024)
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

CHECK results for graper on nebbiolo2

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: graper
Version: 1.22.0
Command: /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.20-bioc/R/site-library --timings graper_1.22.0.tar.gz
StartedAt: 2024-12-17 00:44:25 -0500 (Tue, 17 Dec 2024)
EndedAt: 2024-12-17 00:49:22 -0500 (Tue, 17 Dec 2024)
EllapsedTime: 297.4 seconds
RetCode: 0
Status:   OK  
CheckDir: graper.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.20-bioc/R/site-library --timings graper_1.22.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck’
* using R version 4.4.2 (2024-10-31)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
    GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.22.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib:
  cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES'
 OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking C++ specification ... NOTE
  Specified C++11: please drop specification unless essential
* checking installed package size ... NOTE
  installed size is  6.0Mb
  sub-directories of 1Mb or more:
    libs   5.8Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: 4 NOTEs
See
  ‘/home/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.20-bioc/R/site-library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
using C++11
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall  -c fit_graper.cpp -o fit_graper.o
In file included from /home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11,
                 from /home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/math/special_functions/math_fwd.hpp:29,
                 from /home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/math/special_functions/digamma.hpp:15,
                 from graper_linear_dense_ff.h:2,
                 from fit_graper.cpp:4:
/home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp]
   23 | #    warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
      |      ^~~~~~~
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.20-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.20-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.20-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.20-bioc/R/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-864.891
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-595.482
ELB improved by 269.408

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-534.028
ELB improved by 61.4538

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-489.646
ELB improved by 44.3821

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.962
ELB improved by 24.684

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.644
ELB improved by 11.3184

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.929
ELB improved by 5.71526

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.576
ELB improved by 4.35281

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.452
ELB improved by 4.12391

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.195
ELB improved by 4.25688

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.724
ELB improved by 4.47139

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.251
ELB improved by 4.47291

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.25
ELB improved by 4.00052

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.156
ELB improved by 3.09421

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.039
ELB improved by 2.1175

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.66
ELB improved by 1.37866

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.739
ELB improved by 0.921079

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.083
ELB improved by 0.655475

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.586
ELB improved by 0.497368

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.189
ELB improved by 0.397081

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.86
ELB improved by 0.329031

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.58
ELB improved by 0.280167

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.336
ELB improved by 0.24355

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.121
ELB improved by 0.215255

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.928
ELB improved by 0.192915

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.753
ELB improved by 0.175012

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.592
ELB improved by 0.160523

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.444
ELB improved by 0.148732

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.305
ELB improved by 0.139126

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.173
ELB improved by 0.131331

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.048
ELB improved by 0.125081

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.928
ELB improved by 0.120194

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.811
ELB improved by 0.116561

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.697
ELB improved by 0.11415

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.584
ELB improved by 0.113008

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.471
ELB improved by 0.113284

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.356
ELB improved by 0.115251

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.236
ELB improved by 0.119346

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.11
ELB improved by 0.126198

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.974
ELB improved by 0.136605

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.822
ELB improved by 0.151343

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.652
ELB improved by 0.170652

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.458
ELB improved by 0.193445

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.241
ELB improved by 0.216945

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.003
ELB improved by 0.237835

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.749
ELB improved by 0.254251

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.483
ELB improved by 0.266245

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.208
ELB improved by 0.274566

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.929
ELB improved by 0.279701

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.647
ELB improved by 0.281739

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.366
ELB improved by 0.280513

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.091
ELB improved by 0.275742

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.823
ELB improved by 0.267173

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.569
ELB improved by 0.25475

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.33
ELB improved by 0.238733

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.11
ELB improved by 0.219747

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.912
ELB improved by 0.198717

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.735
ELB improved by 0.176728

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.58
ELB improved by 0.154854

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.446
ELB improved by 0.134014

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.331
ELB improved by 0.114876

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.233
ELB improved by 0.0978398

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.15
ELB improved by 0.0830589

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.08
ELB improved by 0.0704986

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.02
ELB improved by 0.0599973

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.968
ELB improved by 0.0513219

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.924
ELB improved by 0.0442096

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.886
ELB improved by 0.0383968

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.852
ELB improved by 0.0336354

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.822
ELB improved by 0.0297029

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.796
ELB improved by 0.0264077

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.772
ELB improved by 0.0235931

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.751
ELB improved by 0.0211384

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.732
ELB improved by 0.0189578

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.715
ELB improved by 0.0169958

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.7
ELB improved by 0.01522

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.686
ELB improved by 0.0136134

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.674
ELB improved by 0.0121666

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.663
ELB improved by 0.0108732

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.654
ELB improved by 0.00972627

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-879.953
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-560.596
ELB improved by 319.357

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-501.28
ELB improved by 59.3163

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.484
ELB improved by 33.7958

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.018
ELB improved by 12.4664

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.688
ELB improved by 5.32958

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.149
ELB improved by 3.53888

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.14
ELB improved by 3.00937

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.223
ELB improved by 2.91665

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.203
ELB improved by 3.02056

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.984
ELB improved by 3.21873

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.551
ELB improved by 3.43265

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.001
ELB improved by 3.55037

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.566
ELB improved by 3.4351

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.575
ELB improved by 2.9911

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.292
ELB improved by 2.28267

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.736
ELB improved by 1.55645

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.72
ELB improved by 1.01519

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.04
ELB improved by 0.680536

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.555
ELB improved by 0.485077

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.187
ELB improved by 0.367415

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.896
ELB improved by 0.291789

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.656
ELB improved by 0.239739

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.454
ELB improved by 0.201761

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.281
ELB improved by 0.172758

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.132
ELB improved by 0.149835

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413
ELB improved by 0.131249

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.884
ELB improved by 0.115888

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.781
ELB improved by 0.103008

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.689
ELB improved by 0.0920831

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.607
ELB improved by 0.082733

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.532
ELB improved by 0.0746701

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.464
ELB improved by 0.0676725

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.403
ELB improved by 0.0615657

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.346
ELB improved by 0.0562102

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.295
ELB improved by 0.051493

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.248
ELB improved by 0.0473214

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.204
ELB improved by 0.0436191

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.164
ELB improved by 0.0403224

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.126
ELB improved by 0.0373781

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.092
ELB improved by 0.0347412

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.059
ELB improved by 0.0323737

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.029
ELB improved by 0.0302429

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.001
ELB improved by 0.0283212

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.974
ELB improved by 0.0265846

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.949
ELB improved by 0.0250124

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.925
ELB improved by 0.0235867

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.903
ELB improved by 0.0222919

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.882
ELB improved by 0.0211143

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.862
ELB improved by 0.020042

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.843
ELB improved by 0.0190644

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.825
ELB improved by 0.0181723

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.807
ELB improved by 0.0173574

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.791
ELB improved by 0.0166125

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.775
ELB improved by 0.015931

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.76
ELB improved by 0.0153072

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.745
ELB improved by 0.014736

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.731
ELB improved by 0.0142127

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.717
ELB improved by 0.0137331

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.704
ELB improved by 0.0132936

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.691
ELB improved by 0.0128908

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.678
ELB improved by 0.0125217

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.666
ELB improved by 0.0121835

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.654
ELB improved by 0.0118738

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.643
ELB improved by 0.0115904

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.631
ELB improved by 0.0113312

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.62
ELB improved by 0.0110944

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.609
ELB improved by 0.0108784

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.599
ELB improved by 0.0106816

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.588
ELB improved by 0.0105027

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.578
ELB improved by 0.0103404

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.568
ELB improved by 0.0101935

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.557
ELB improved by 0.0100611

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.548
ELB improved by 0.00994223

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-884.078
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-549.331
ELB improved by 334.747

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-496.928
ELB improved by 52.403

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.945
ELB improved by 23.9834

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.833
ELB improved by 10.1112

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.009
ELB improved by 5.82391

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.102
ELB improved by 4.90793

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.886
ELB improved by 5.21571

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.105
ELB improved by 5.78046

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.206
ELB improved by 5.89957

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.027
ELB improved by 5.17867

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.158
ELB improved by 3.86964

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.483
ELB improved by 2.67457

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.553
ELB improved by 1.92989

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.028
ELB improved by 1.52532

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.719
ELB improved by 1.30868

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.527
ELB improved by 1.19171

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.389
ELB improved by 1.13853

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.232
ELB improved by 1.15717

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.941
ELB improved by 1.29114

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.451
ELB improved by 1.48998

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.006
ELB improved by 1.445

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.772
ELB improved by 1.23391

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.703
ELB improved by 1.06892

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.754
ELB improved by 0.948403

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.903
ELB improved by 0.851325

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.13
ELB improved by 0.772848

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.411
ELB improved by 0.719484

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.703
ELB improved by 0.70776

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.95
ELB improved by 0.752456

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.159
ELB improved by 0.790974

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.455
ELB improved by 0.704207

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.891
ELB improved by 0.563879

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.421
ELB improved by 0.469905

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.982
ELB improved by 0.439248

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.511
ELB improved by 0.471026

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400
ELB improved by 0.510795

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.561
ELB improved by 0.439571

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.263
ELB improved by 0.297338

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.07
ELB improved by 0.193269

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.936
ELB improved by 0.134582

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.835
ELB improved by 0.100628

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.756
ELB improved by 0.0792797

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.691
ELB improved by 0.0649026

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.636
ELB improved by 0.054749

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.589
ELB improved by 0.0473543

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.547
ELB improved by 0.0418903

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.509
ELB improved by 0.0378879

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.474
ELB improved by 0.0351102

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.44
ELB improved by 0.0334968

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.407
ELB improved by 0.03315

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.373
ELB improved by 0.0343374

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.335
ELB improved by 0.0374656

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.292
ELB improved by 0.0429093

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.242
ELB improved by 0.0504864

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.183
ELB improved by 0.0585094

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.12
ELB improved by 0.0632697

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.059
ELB improved by 0.0608844

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.008
ELB improved by 0.0510873

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.97
ELB improved by 0.0379969

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.944
ELB improved by 0.0262714

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.926
ELB improved by 0.0179738

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.913
ELB improved by 0.0128633

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.903
ELB improved by 0.00991151

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-881.169
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-603.19
ELB improved by 277.978

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-543.951
ELB improved by 59.2394

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-499.379
ELB improved by 44.5718

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-476.234
ELB improved by 23.1453

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.538
ELB improved by 10.6963

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.46
ELB improved by 7.07717

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.838
ELB improved by 6.62279

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.966
ELB improved by 6.87192

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.144
ELB improved by 6.82161

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.281
ELB improved by 5.86282

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.039
ELB improved by 4.24269

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.228
ELB improved by 2.81051

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.41
ELB improved by 1.81822

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.25
ELB improved by 1.15958

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.475
ELB improved by 0.775006

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.903
ELB improved by 0.572441

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.433
ELB improved by 0.469878

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.013
ELB improved by 0.419718

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.62
ELB improved by 0.393741

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.249
ELB improved by 0.370767

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.912
ELB improved by 0.337117

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.618
ELB improved by 0.29413

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.364
ELB improved by 0.253351

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.141
ELB improved by 0.223024

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.937
ELB improved by 0.204353

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.742
ELB improved by 0.194293

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.554
ELB improved by 0.188471

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.37
ELB improved by 0.183979

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.192
ELB improved by 0.178268

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.028
ELB improved by 0.164084

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.892
ELB improved by 0.135568

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.791
ELB improved by 0.101478

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.715
ELB improved by 0.0753348

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.655
ELB improved by 0.0601965

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.603
ELB improved by 0.0522874

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.555
ELB improved by 0.0479547

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.51
ELB improved by 0.0452691

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.466
ELB improved by 0.04341

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.424
ELB improved by 0.0420493

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.383
ELB improved by 0.0410493

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.343
ELB improved by 0.0403435

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.303
ELB improved by 0.0398936

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.263
ELB improved by 0.0396735

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.224
ELB improved by 0.039664

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.184
ELB improved by 0.0398496

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.143
ELB improved by 0.0402182

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.103
ELB improved by 0.0407594

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.061
ELB improved by 0.0414651

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.019
ELB improved by 0.0423281

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.976
ELB improved by 0.0433425

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.931
ELB improved by 0.0445035

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.885
ELB improved by 0.0458069

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.838
ELB improved by 0.0472489

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.789
ELB improved by 0.0488268

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.739
ELB improved by 0.0505378

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.686
ELB improved by 0.0523797

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.632
ELB improved by 0.0543507

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.575
ELB improved by 0.0564489

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.517
ELB improved by 0.0586729

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.456
ELB improved by 0.0610209

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.392
ELB improved by 0.0634911

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.326
ELB improved by 0.0660812

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.257
ELB improved by 0.0687882

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.186
ELB improved by 0.0716084

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.111
ELB improved by 0.0745368

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.034
ELB improved by 0.0775676

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.953
ELB improved by 0.0806941

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.869
ELB improved by 0.0839093

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.782
ELB improved by 0.0872075

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.691
ELB improved by 0.0905863

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.597
ELB improved by 0.0940505

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.5
ELB improved by 0.0976183

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.398
ELB improved by 0.101331

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.293
ELB improved by 0.105265

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.183
ELB improved by 0.109558

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.069
ELB improved by 0.114437

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.949
ELB improved by 0.12026

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.821
ELB improved by 0.127576

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.684
ELB improved by 0.13717

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.534
ELB improved by 0.15005

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.367
ELB improved by 0.167257

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.177
ELB improved by 0.189297

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.962
ELB improved by 0.214969

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.723
ELB improved by 0.239379

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.471
ELB improved by 0.252556

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.226
ELB improved by 0.244656

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.008
ELB improved by 0.217354

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.826
ELB improved by 0.182977

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.674
ELB improved by 0.151465

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.548
ELB improved by 0.125821

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.443
ELB improved by 0.105523

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.353
ELB improved by 0.0893199

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.277
ELB improved by 0.0761438

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.212
ELB improved by 0.0652414

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.156
ELB improved by 0.0561035

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.108
ELB improved by 0.0483797

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.066
ELB improved by 0.0418179

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.029
ELB improved by 0.0362262

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.998
ELB improved by 0.0314522

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.971
ELB improved by 0.0273709

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.947
ELB improved by 0.0238775

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.926
ELB improved by 0.0208836

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.908
ELB improved by 0.0183144

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.891
ELB improved by 0.0161065

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.877
ELB improved by 0.0142058

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.865
ELB improved by 0.012567

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.854
ELB improved by 0.0111514

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.844
ELB improved by 0.00992639

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  1.805   0.124   1.918

Example timings

graper.Rcheck/graper-Ex.timings

nameusersystemelapsed
coef.graper0.0530.0000.054
getPIPs0.0490.0020.050
graper0.0810.0020.082
makeExampleData0.0080.0020.010
makeExampleDataWithUnequalGroups0.0110.0000.012
plotELBO0.1980.0480.248
plotGroupPenalties0.6700.0110.683
plotPosterior0.5890.0340.621
predict.graper2.0530.0132.065
print.graper0.0460.0070.053