Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L  M  N [O] P  Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.2: INSTALL report for openCyto on zin1

This page was generated on 2015-08-24 10:49:36 -0700 (Mon, 24 Aug 2015).

Package 709/1071HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
openCyto 1.7.4
Mike Jiang
Snapshot Date: 2015-08-23 16:24:14 -0700 (Sun, 23 Aug 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/openCyto
Last Changed Rev: 106402 / Revision: 107696
Last Changed Date: 2015-07-14 16:45:23 -0700 (Tue, 14 Jul 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: openCyto
Version: 1.7.4
Command: /home/biocbuild/bbs-3.2-bioc/R/bin/R CMD INSTALL openCyto
StartedAt: 2015-08-23 17:20:55 -0700 (Sun, 23 Aug 2015)
EndedAt: 2015-08-23 17:21:12 -0700 (Sun, 23 Aug 2015)
EllapsedTime: 16.5 seconds
RetCode: 0
Status:  OK 

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.2-bioc/R/bin/R CMD INSTALL openCyto
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.2-bioc/R/library’
* installing *source* package ‘openCyto’ ...
** libs
g++ -I/home/biocbuild/bbs-3.2-bioc/R/include -DNDEBUG  -I/usr/local/include -I"/home/biocbuild/bbs-3.2-bioc/R/library/Rcpp/include"   -fpic  -g -O2  -Wall -c RcppExports.cpp -o RcppExports.o
g++ -I/home/biocbuild/bbs-3.2-bioc/R/include -DNDEBUG  -I/usr/local/include -I"/home/biocbuild/bbs-3.2-bioc/R/library/Rcpp/include"   -fpic  -g -O2  -Wall -c misc.cpp -o misc.o
gcc -std=gnu99 -I/home/biocbuild/bbs-3.2-bioc/R/include -DNDEBUG  -I/usr/local/include -I"/home/biocbuild/bbs-3.2-bioc/R/library/Rcpp/include"   -fpic  -g -O2  -Wall -c unlockNamespace.c -o unlockNamespace.o
g++ -shared -L/home/biocbuild/bbs-3.2-bioc/R/lib -L/usr/local/lib -o openCyto.so RcppExports.o misc.o unlockNamespace.o -L/home/biocbuild/bbs-3.2-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.2-bioc/R/library/openCyto/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   ‘HowToWriteCSVTemplate.Rmd’ 
   ‘openCytoVignette.Rmd’ 
** testing if installed package can be loaded
* DONE (openCyto)