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BioC 3.2: BUILD report for lumi on zin1

This page was generated on 2015-08-24 10:47:12 -0700 (Mon, 24 Aug 2015).

Package 558/1071HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
lumi 2.21.2
Pan Du
Snapshot Date: 2015-08-23 16:24:14 -0700 (Sun, 23 Aug 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/lumi
Last Changed Rev: 105796 / Revision: 107696
Last Changed Date: 2015-07-03 20:46:53 -0700 (Fri, 03 Jul 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK [ OK ] WARNINGS UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: lumi
Version: 2.21.2
Command: /home/biocbuild/bbs-3.2-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data lumi
StartedAt: 2015-08-23 17:40:58 -0700 (Sun, 23 Aug 2015)
EndedAt: 2015-08-23 17:42:46 -0700 (Sun, 23 Aug 2015)
EllapsedTime: 108.6 seconds
RetCode: 0
Status:  OK 
PackageFile: lumi_2.21.2.tar.gz
PackageFileSize: 8.901 MiB

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/bbs-3.2-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data lumi
###
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* checking for file ‘lumi/DESCRIPTION’ ... OK
* preparing ‘lumi’:
* checking DESCRIPTION meta-information ... OK
Warning: bad markup (extra space?) at lumiMethyR.Rd:18:16
Warning: bad markup (extra space?) at lumiMethyR.Rd:19:28
Warning: bad markup (extra space?) at lumiMethyR.Rd:20:13
* installing the package to build vignettes
* creating vignettes ... OK
* excluding invalid files
Subdirectory 'R' contains invalid file names:
  ‘affyExpresso.R.deprecated’ ‘affyVstRma.R.deprecated’
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* looking to see if a ‘data/datalist’ file should be added
* building ‘lumi_2.21.2.tar.gz’