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This page was generated on 2023-06-01 18:17:19 -0400 (Thu, 01 Jun 2023).

HostnameOSArch (*)R versionInstalled pkgs
xps15Linux (Ubuntu 23.04)x86_644.3.0 Patched (2023-05-23 r84466) -- "Already Tomorrow" 544
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BUILD results for DelayedArray on xps15


To the developers/maintainers of the DelayedArray package:
Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Package 26/91HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DelayedArray 0.27.4  (landing page)
Hervé Pagès
Snapshot Date: 2023-06-01 15:10:15 -0400 (Thu, 01 Jun 2023)
git_url: https://git.bioconductor.org/packages/DelayedArray
git_branch: devel
git_last_commit: b7734e3
git_last_commit_date: 2023-05-22 21:02:57 -0400 (Mon, 22 May 2023)
xps15Linux (Ubuntu 23.04) / x86_64  OK    ERROR  skipped

Summary

Package: DelayedArray
Version: 0.27.4
Command: /home/hpages/bbs-3.18-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data DelayedArray
StartedAt: 2023-06-01 12:39:03 -0700 (Thu, 01 Jun 2023)
EndedAt: 2023-06-01 12:39:45 -0700 (Thu, 01 Jun 2023)
EllapsedTime: 42.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/hpages/bbs-3.18-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data DelayedArray
###
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* checking for file ‘DelayedArray/DESCRIPTION’ ... OK
* preparing ‘DelayedArray’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘02-Implementing_a_backend.Rmd’ using rmarkdown
--- finished re-building ‘02-Implementing_a_backend.Rmd’

--- re-building ‘01-Working_with_large_arrays.Rnw’ using knitr

Quitting from lines 44-55 [setup] (01-Working_with_large_arrays.Rnw)
Error: processing vignette '01-Working_with_large_arrays.Rnw' failed with diagnostics:
there is no package called 'HDF5Array'
--- failed re-building ‘01-Working_with_large_arrays.Rnw’

--- re-building ‘03-DelayedArray_HDF5Array_update.Rnw’ using knitr

Quitting from lines 42-49 [setup] (03-DelayedArray_HDF5Array_update.Rnw)
Error: processing vignette '03-DelayedArray_HDF5Array_update.Rnw' failed with diagnostics:
there is no package called 'HDF5Array'
--- failed re-building ‘03-DelayedArray_HDF5Array_update.Rnw’

SUMMARY: processing the following files failed:
  ‘01-Working_with_large_arrays.Rnw’
  ‘03-DelayedArray_HDF5Array_update.Rnw’

Error: Vignette re-building failed.
Execution halted