Multiple platform build/check report for BioC 3.17 - BUILD results for igvR on nebbiolo1

Back to Multiple platform build/check report for BioC 3.17

[I]

This page was generated on 2023-04-12 10:55:26 -0400 (Wed, 12 Apr 2023).

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 22.04.1 LTS)	x86_64	4.3.0 alpha (2023-04-03 r84154)	4547
nebbiolo2	Linux (Ubuntu 20.04.5 LTS)	x86_64	R Under development (unstable) (2023-02-14 r83833) -- "Unsuffered Consequences"	4333
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for igvR on nebbiolo1

To the developers/maintainers of the igvR package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/igvR.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

igvR 1.19.7 (landing page)
Paul Shannon

Snapshot Date: 2023-04-11 14:00:16 -0400 (Tue, 11 Apr 2023)

git_url: https://git.bioconductor.org/packages/igvR

git_branch: devel

git_last_commit: 26e99bd

git_last_commit_date: 2023-03-13 16:58:32 -0400 (Mon, 13 Mar 2023)

nebbiolo1

Linux (Ubuntu 22.04.1 LTS) / x86_64

WARNINGS

nebbiolo2

Linux (Ubuntu 20.04.5 LTS) / x86_64

WARNINGS

Summary

Package: igvR

Version: 1.19.7

Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data igvR

StartedAt: 2023-04-11 16:48:08 -0400 (Tue, 11 Apr 2023)

EndedAt: 2023-04-11 16:49:07 -0400 (Tue, 11 Apr 2023)

EllapsedTime: 58.4 seconds

RetCode: 0

Status: OK

PackageFile: igvR_1.19.7.tar.gz

PackageFileSize: 8.593 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data igvR
###
##############################################################################
##############################################################################


* checking for file ‘igvR/DESCRIPTION’ ... OK
* preparing ‘igvR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
WARNING: directory ‘igvR/explore’ is empty
WARNING: directory ‘igvR/inst/browserCode/lib’ is empty
WARNING: directory ‘igvR/misc’ is empty
* building ‘igvR_1.19.7.tar.gz’