Back to Multiple platform build/check report for BioC 3.17 |
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This page was generated on 2023-04-12 10:55:26 -0400 (Wed, 12 Apr 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo1 | Linux (Ubuntu 22.04.1 LTS) | x86_64 | 4.3.0 alpha (2023-04-03 r84154) | 4547 |
nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | R Under development (unstable) (2023-02-14 r83833) -- "Unsuffered Consequences" | 4333 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the HPiP package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details. |
Package 941/2207 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.5.4 (landing page) Matineh Rahmatbakhsh
| nebbiolo1 | Linux (Ubuntu 22.04.1 LTS) / x86_64 | OK | OK | OK | |||||||||
nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | OK | OK | OK | ||||||||||
Package: HPiP |
Version: 1.5.4 |
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/site-library --timings HPiP_1.5.4.tar.gz |
StartedAt: 2023-04-11 20:56:03 -0400 (Tue, 11 Apr 2023) |
EndedAt: 2023-04-11 21:11:26 -0400 (Tue, 11 Apr 2023) |
EllapsedTime: 922.5 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/site-library --timings HPiP_1.5.4.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.17-bioc/meat/HPiP.Rcheck’ * using R version 4.3.0 alpha (2023-04-03 r84154) * using platform: x86_64-pc-linux-gnu (64-bit) * R was compiled by gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0 GNU Fortran (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0 * running under: Ubuntu 22.04.2 LTS * using session charset: UTF-8 * checking for file ‘HPiP/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HPiP’ version ‘1.5.4’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HPiP’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: ‘ftrCOOL’ * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed var_imp 37.249 1.076 38.326 FSmethod 34.810 0.568 35.379 corr_plot 34.568 0.588 35.157 pred_ensembel 14.111 0.676 11.030 getFASTA 0.485 0.012 5.084 enrichfindP 0.449 0.013 51.136 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘runTests.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... ‘HPiP_tutorial.Rmd’ using ‘UTF-8’... OK NONE * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 1 NOTE See ‘/home/biocbuild/bbs-3.17-bioc/meat/HPiP.Rcheck/00check.log’ for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/site-library’ * installing *source* package ‘HPiP’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R version 4.3.0 alpha (2023-04-03 r84154) Copyright (C) 2023 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 105.059413 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 94.541438 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 98.567247 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 97.787063 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 98.229822 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 102.165130 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 99.376519 final value 94.252920 converged Fitting Repeat 3 # weights: 305 initial value 102.852796 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 96.530460 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 100.822207 iter 10 value 94.276803 final value 94.275371 converged Fitting Repeat 1 # weights: 507 initial value 118.417806 final value 94.484211 converged Fitting Repeat 2 # weights: 507 initial value 104.795775 iter 10 value 91.922076 iter 20 value 91.609360 final value 91.609200 converged Fitting Repeat 3 # weights: 507 initial value 97.045797 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 98.983070 final value 94.484211 converged Fitting Repeat 5 # weights: 507 initial value 95.372531 final value 94.482149 converged Fitting Repeat 1 # weights: 103 initial value 101.140941 iter 10 value 94.466063 iter 20 value 92.382723 iter 30 value 90.913272 iter 40 value 88.313679 iter 50 value 87.874369 iter 60 value 87.649232 iter 70 value 85.929596 iter 80 value 81.971748 iter 90 value 81.715729 iter 100 value 81.411460 final value 81.411460 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 101.466877 iter 10 value 94.415485 iter 20 value 85.807221 iter 30 value 84.721647 iter 40 value 83.930837 iter 50 value 83.916308 iter 60 value 83.891918 iter 70 value 83.755301 final value 83.744113 converged Fitting Repeat 3 # weights: 103 initial value 103.774003 iter 10 value 94.373728 iter 20 value 88.807856 iter 30 value 85.065633 iter 40 value 84.454144 iter 50 value 83.993182 iter 60 value 83.882373 iter 70 value 83.756418 iter 80 value 83.744113 iter 80 value 83.744112 iter 80 value 83.744112 final value 83.744112 converged Fitting Repeat 4 # weights: 103 initial value 101.634491 iter 10 value 94.495259 iter 20 value 86.889458 iter 30 value 84.700418 iter 40 value 83.927672 iter 50 value 83.680811 iter 60 value 83.598747 iter 70 value 83.591996 iter 80 value 83.568906 iter 90 value 82.948084 iter 100 value 81.405374 final value 81.405374 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 104.572087 iter 10 value 94.433907 iter 20 value 85.002475 iter 30 value 84.487249 iter 40 value 84.388143 iter 50 value 84.261887 iter 60 value 83.080231 iter 70 value 82.618341 final value 82.617865 converged Fitting Repeat 1 # weights: 305 initial value 108.663707 iter 10 value 94.435248 iter 20 value 86.112344 iter 30 value 84.389658 iter 40 value 83.798521 iter 50 value 82.025653 iter 60 value 81.041480 iter 70 value 80.638000 iter 80 value 80.480005 iter 90 value 80.398187 iter 100 value 80.376573 final value 80.376573 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.158480 iter 10 value 94.197629 iter 20 value 93.501570 iter 30 value 93.451673 iter 40 value 91.282091 iter 50 value 89.517670 iter 60 value 86.690263 iter 70 value 82.514601 iter 80 value 81.467332 iter 90 value 81.086990 iter 100 value 80.630893 final value 80.630893 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 104.502063 iter 10 value 94.790973 iter 20 value 91.006593 iter 30 value 86.391451 iter 40 value 84.058735 iter 50 value 83.535226 iter 60 value 83.189862 iter 70 value 82.572761 iter 80 value 82.203670 iter 90 value 81.115567 iter 100 value 80.898386 final value 80.898386 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 100.421514 iter 10 value 94.520178 iter 20 value 93.907728 iter 30 value 85.213173 iter 40 value 84.795743 iter 50 value 84.095664 iter 60 value 80.562628 iter 70 value 79.915786 iter 80 value 79.812233 iter 90 value 79.787266 iter 100 value 79.543307 final value 79.543307 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 110.322939 iter 10 value 96.257612 iter 20 value 94.574905 iter 30 value 85.157191 iter 40 value 84.831321 iter 50 value 84.688692 iter 60 value 83.597847 iter 70 value 81.353585 iter 80 value 80.221177 iter 90 value 79.933897 iter 100 value 79.788978 final value 79.788978 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 107.035702 iter 10 value 94.766025 iter 20 value 94.484563 iter 30 value 94.156281 iter 40 value 88.837921 iter 50 value 85.832321 iter 60 value 85.086437 iter 70 value 84.803007 iter 80 value 83.686412 iter 90 value 81.747549 iter 100 value 81.078759 final value 81.078759 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 108.692466 iter 10 value 98.401376 iter 20 value 94.557054 iter 30 value 94.492878 iter 40 value 88.039758 iter 50 value 85.979178 iter 60 value 84.010273 iter 70 value 83.749065 iter 80 value 81.311420 iter 90 value 80.436123 iter 100 value 80.086929 final value 80.086929 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 106.775627 iter 10 value 93.650981 iter 20 value 85.338635 iter 30 value 84.487629 iter 40 value 81.529193 iter 50 value 80.951734 iter 60 value 80.671757 iter 70 value 80.422416 iter 80 value 79.937038 iter 90 value 79.703262 iter 100 value 79.619294 final value 79.619294 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 110.227963 iter 10 value 94.488125 iter 20 value 87.752168 iter 30 value 86.543106 iter 40 value 85.320392 iter 50 value 84.636446 iter 60 value 84.409394 iter 70 value 82.116103 iter 80 value 81.424152 iter 90 value 80.459547 iter 100 value 79.976271 final value 79.976271 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 126.735649 iter 10 value 95.409965 iter 20 value 90.034181 iter 30 value 83.085972 iter 40 value 82.005573 iter 50 value 81.643788 iter 60 value 80.541501 iter 70 value 79.864564 iter 80 value 79.351898 iter 90 value 79.216657 iter 100 value 79.161704 final value 79.161704 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 97.606778 final value 94.485728 converged Fitting Repeat 2 # weights: 103 initial value 95.139927 final value 94.485696 converged Fitting Repeat 3 # weights: 103 initial value 96.077051 final value 94.485805 converged Fitting Repeat 4 # weights: 103 initial value 97.659317 final value 94.485922 converged Fitting Repeat 5 # weights: 103 initial value 101.807637 final value 94.485761 converged Fitting Repeat 1 # weights: 305 initial value 95.834183 iter 10 value 94.293736 final value 94.293566 converged Fitting Repeat 2 # weights: 305 initial value 96.118399 iter 10 value 83.419817 iter 20 value 83.338810 iter 30 value 83.336752 iter 40 value 83.334671 iter 50 value 83.214353 iter 60 value 83.055972 final value 83.055292 converged Fitting Repeat 3 # weights: 305 initial value 94.708452 iter 10 value 94.485408 final value 94.484220 converged Fitting Repeat 4 # weights: 305 initial value 99.945295 iter 10 value 93.824344 iter 20 value 93.305137 iter 30 value 93.289550 iter 40 value 93.278091 iter 50 value 93.277253 iter 50 value 93.277252 final value 93.277250 converged Fitting Repeat 5 # weights: 305 initial value 98.497625 iter 10 value 94.488475 iter 20 value 94.475516 iter 30 value 90.618852 iter 40 value 84.833906 final value 84.739287 converged Fitting Repeat 1 # weights: 507 initial value 109.136380 iter 10 value 90.270520 iter 20 value 87.503608 iter 30 value 87.389896 iter 40 value 85.373595 iter 50 value 85.318573 iter 60 value 85.317487 final value 85.317342 converged Fitting Repeat 2 # weights: 507 initial value 97.343912 iter 10 value 94.451313 iter 20 value 93.698019 iter 30 value 84.529156 iter 40 value 80.381750 iter 50 value 80.321246 iter 60 value 80.321078 iter 70 value 80.320157 final value 80.319876 converged Fitting Repeat 3 # weights: 507 initial value 97.492969 iter 10 value 92.795923 iter 20 value 92.793569 iter 30 value 91.533829 iter 40 value 85.010498 iter 50 value 84.958387 iter 60 value 84.956183 iter 70 value 84.955792 iter 70 value 84.955792 final value 84.955792 converged Fitting Repeat 4 # weights: 507 initial value 99.934787 iter 10 value 94.450985 iter 20 value 92.418655 iter 30 value 91.200070 iter 40 value 85.741586 iter 50 value 80.732719 iter 60 value 80.575276 iter 70 value 80.403761 iter 80 value 80.402170 iter 90 value 79.669652 iter 100 value 79.347596 final value 79.347596 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 116.197432 iter 10 value 94.491784 iter 20 value 94.167941 iter 30 value 85.244922 iter 40 value 85.240421 iter 50 value 85.236718 iter 60 value 85.234977 iter 70 value 83.582812 iter 80 value 83.187693 iter 90 value 82.546919 iter 100 value 82.080655 final value 82.080655 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 95.941717 final value 93.637380 converged Fitting Repeat 2 # weights: 103 initial value 98.234845 final value 94.275362 converged Fitting Repeat 3 # weights: 103 initial value 96.173981 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 99.603192 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 106.829231 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 102.334155 final value 94.275362 converged Fitting Repeat 2 # weights: 305 initial value 96.600048 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 96.576570 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 107.034076 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 94.979374 final value 94.461207 converged Fitting Repeat 1 # weights: 507 initial value 100.966807 iter 10 value 92.008364 iter 20 value 90.934276 iter 30 value 90.743657 final value 90.743596 converged Fitting Repeat 2 # weights: 507 initial value 99.313148 final value 94.275362 converged Fitting Repeat 3 # weights: 507 initial value 110.189350 final value 93.942286 converged Fitting Repeat 4 # weights: 507 initial value 96.783053 final value 94.275362 converged Fitting Repeat 5 # weights: 507 initial value 106.947402 final value 94.275362 converged Fitting Repeat 1 # weights: 103 initial value 103.096604 iter 10 value 94.477104 iter 20 value 94.319769 iter 30 value 94.065778 iter 40 value 93.343655 iter 50 value 91.489951 iter 60 value 86.699014 iter 70 value 85.663951 iter 80 value 85.205112 iter 90 value 82.679682 iter 100 value 80.566650 final value 80.566650 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 114.980059 iter 10 value 94.458122 iter 20 value 93.521395 iter 30 value 93.398149 iter 40 value 93.391594 iter 50 value 93.384660 iter 60 value 85.125476 iter 70 value 84.060450 iter 80 value 83.549108 iter 90 value 83.208622 iter 100 value 82.200980 final value 82.200980 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 102.519604 iter 10 value 92.981336 iter 20 value 86.034814 iter 30 value 85.478487 iter 40 value 84.926197 iter 50 value 83.430983 iter 60 value 82.605104 iter 70 value 81.683309 iter 80 value 80.437052 iter 90 value 80.333923 final value 80.333865 converged Fitting Repeat 4 # weights: 103 initial value 110.422739 iter 10 value 94.482545 iter 20 value 93.742710 iter 30 value 92.992577 iter 40 value 89.139681 iter 50 value 83.665639 iter 60 value 82.996006 iter 70 value 81.865854 iter 80 value 81.244150 iter 90 value 80.745299 iter 100 value 80.550805 final value 80.550805 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 100.496125 iter 10 value 94.436960 iter 20 value 93.788798 iter 30 value 93.731776 iter 40 value 93.702697 iter 50 value 92.360192 iter 60 value 87.409633 iter 70 value 85.164552 iter 80 value 84.257311 iter 90 value 83.040248 iter 100 value 82.064346 final value 82.064346 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 100.559949 iter 10 value 94.297894 iter 20 value 88.608444 iter 30 value 85.336972 iter 40 value 83.962603 iter 50 value 82.226473 iter 60 value 81.815769 iter 70 value 80.480407 iter 80 value 80.426027 iter 90 value 80.259884 iter 100 value 79.853249 final value 79.853249 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 102.261950 iter 10 value 94.299452 iter 20 value 86.650559 iter 30 value 83.937076 iter 40 value 81.551827 iter 50 value 80.301108 iter 60 value 80.187438 iter 70 value 79.774778 iter 80 value 79.550726 iter 90 value 79.045132 iter 100 value 78.942316 final value 78.942316 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 102.683981 iter 10 value 95.041648 iter 20 value 92.329600 iter 30 value 91.141382 iter 40 value 87.262790 iter 50 value 86.952883 iter 60 value 84.657919 iter 70 value 81.539275 iter 80 value 80.032117 iter 90 value 79.500559 iter 100 value 79.293868 final value 79.293868 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 111.828296 iter 10 value 93.357820 iter 20 value 85.420580 iter 30 value 85.128507 iter 40 value 83.293260 iter 50 value 82.826666 iter 60 value 81.715860 iter 70 value 80.253203 iter 80 value 79.606157 iter 90 value 79.568985 iter 100 value 79.505712 final value 79.505712 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 113.624777 iter 10 value 94.461315 iter 20 value 89.166041 iter 30 value 86.878240 iter 40 value 84.981893 iter 50 value 82.162587 iter 60 value 81.561913 iter 70 value 81.371735 iter 80 value 81.090558 iter 90 value 80.744665 iter 100 value 80.460055 final value 80.460055 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 110.366741 iter 10 value 94.208778 iter 20 value 87.984917 iter 30 value 85.405664 iter 40 value 84.910542 iter 50 value 84.082777 iter 60 value 81.023058 iter 70 value 80.013725 iter 80 value 79.107275 iter 90 value 78.971393 iter 100 value 78.900891 final value 78.900891 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 109.522030 iter 10 value 94.623075 iter 20 value 91.845779 iter 30 value 87.304663 iter 40 value 83.987190 iter 50 value 83.371305 iter 60 value 82.806107 iter 70 value 81.221883 iter 80 value 80.412220 iter 90 value 80.268832 iter 100 value 80.071907 final value 80.071907 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 103.817286 iter 10 value 98.592490 iter 20 value 93.564725 iter 30 value 86.516253 iter 40 value 85.444960 iter 50 value 82.507178 iter 60 value 81.594456 iter 70 value 81.073057 iter 80 value 80.552421 iter 90 value 80.267108 iter 100 value 80.108858 final value 80.108858 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 103.781539 iter 10 value 95.260768 iter 20 value 89.556919 iter 30 value 86.388616 iter 40 value 82.889254 iter 50 value 80.591667 iter 60 value 79.905807 iter 70 value 79.407755 iter 80 value 79.365750 iter 90 value 79.208233 iter 100 value 79.050549 final value 79.050549 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 109.981453 iter 10 value 93.361774 iter 20 value 91.987195 iter 30 value 91.054838 iter 40 value 89.594239 iter 50 value 86.398347 iter 60 value 82.591448 iter 70 value 81.565446 iter 80 value 80.267785 iter 90 value 79.885509 iter 100 value 79.669510 final value 79.669510 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 97.908724 iter 10 value 94.486116 iter 20 value 94.484217 final value 94.484213 converged Fitting Repeat 2 # weights: 103 initial value 98.668983 iter 10 value 92.126789 iter 20 value 91.335790 iter 30 value 91.311123 final value 91.307962 converged Fitting Repeat 3 # weights: 103 initial value 121.141421 iter 10 value 94.485800 iter 20 value 94.087175 iter 30 value 86.634045 iter 40 value 86.631159 iter 50 value 86.628589 iter 60 value 86.627748 final value 86.627746 converged Fitting Repeat 4 # weights: 103 initial value 105.100871 final value 94.486020 converged Fitting Repeat 5 # weights: 103 initial value 117.285345 final value 94.485929 converged Fitting Repeat 1 # weights: 305 initial value 95.564537 iter 10 value 87.792793 iter 20 value 84.919927 iter 30 value 84.197667 iter 40 value 83.934882 iter 50 value 83.717122 iter 60 value 83.712365 iter 70 value 83.711731 iter 80 value 83.711418 iter 80 value 83.711418 final value 83.711418 converged Fitting Repeat 2 # weights: 305 initial value 96.729512 iter 10 value 94.488963 iter 20 value 94.465244 iter 30 value 94.462221 iter 40 value 84.085201 iter 50 value 83.602138 iter 60 value 83.440981 iter 70 value 83.374536 iter 70 value 83.374536 iter 70 value 83.374536 final value 83.374536 converged Fitting Repeat 3 # weights: 305 initial value 105.001960 iter 10 value 94.479248 iter 20 value 94.347123 iter 30 value 93.654128 iter 40 value 93.493280 final value 93.493244 converged Fitting Repeat 4 # weights: 305 initial value 96.397466 iter 10 value 94.488402 iter 20 value 94.177014 iter 30 value 87.337379 iter 40 value 85.937222 iter 50 value 85.935180 iter 60 value 85.903058 iter 70 value 85.500118 iter 80 value 85.498868 iter 80 value 85.498867 final value 85.498867 converged Fitting Repeat 5 # weights: 305 initial value 114.389730 iter 10 value 94.488950 iter 20 value 94.484288 iter 30 value 94.008512 iter 40 value 86.730059 iter 50 value 84.381631 iter 60 value 84.324981 iter 70 value 84.278734 iter 80 value 84.242783 iter 90 value 84.242636 final value 84.242537 converged Fitting Repeat 1 # weights: 507 initial value 96.209206 iter 10 value 94.474637 iter 20 value 94.338433 iter 30 value 87.990761 iter 40 value 86.006214 iter 50 value 84.095781 iter 60 value 84.006952 final value 84.005656 converged Fitting Repeat 2 # weights: 507 initial value 107.856444 iter 10 value 88.280998 iter 20 value 87.118206 iter 30 value 86.953405 iter 40 value 86.945843 iter 50 value 86.888765 final value 86.888506 converged Fitting Repeat 3 # weights: 507 initial value 116.898590 iter 10 value 93.930981 iter 20 value 93.925804 iter 30 value 93.922890 iter 40 value 93.639717 iter 50 value 93.542743 final value 93.542732 converged Fitting Repeat 4 # weights: 507 initial value 131.673871 iter 10 value 94.574678 iter 20 value 88.997890 iter 30 value 84.847412 iter 40 value 84.822423 final value 84.821295 converged Fitting Repeat 5 # weights: 507 initial value 111.650320 iter 10 value 92.280374 iter 20 value 85.115244 iter 30 value 84.939348 iter 40 value 83.638262 iter 50 value 83.636267 iter 60 value 83.610345 iter 70 value 82.993040 iter 80 value 82.186980 iter 90 value 81.346589 iter 100 value 81.272882 final value 81.272882 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 102.714833 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 95.687289 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 96.242715 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 99.855810 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 101.616972 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 109.841043 final value 93.915746 converged Fitting Repeat 2 # weights: 305 initial value 98.845892 final value 94.052910 converged Fitting Repeat 3 # weights: 305 initial value 99.314813 final value 93.763751 converged Fitting Repeat 4 # weights: 305 initial value 104.417618 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 98.657305 final value 93.915746 converged Fitting Repeat 1 # weights: 507 initial value 104.341685 final value 94.052910 converged Fitting Repeat 2 # weights: 507 initial value 96.252659 iter 10 value 94.053144 iter 20 value 94.047362 iter 30 value 93.928469 final value 93.912644 converged Fitting Repeat 3 # weights: 507 initial value 100.666501 final value 94.052910 converged Fitting Repeat 4 # weights: 507 initial value 112.183089 final value 93.912644 converged Fitting Repeat 5 # weights: 507 initial value 98.810732 final value 94.052910 converged Fitting Repeat 1 # weights: 103 initial value 101.469736 iter 10 value 93.656661 iter 20 value 90.353937 iter 30 value 86.579029 iter 40 value 85.500003 iter 50 value 84.417197 iter 60 value 83.453427 iter 70 value 83.060393 iter 80 value 82.990334 iter 90 value 82.866951 iter 100 value 82.816514 final value 82.816514 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 98.404693 iter 10 value 93.795241 iter 20 value 93.087104 iter 30 value 92.037880 iter 40 value 91.521731 iter 50 value 90.839394 iter 60 value 86.340627 iter 70 value 83.661246 iter 80 value 83.460446 iter 90 value 83.077252 iter 100 value 82.895230 final value 82.895230 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 103.957912 iter 10 value 94.357623 iter 20 value 94.048064 iter 30 value 93.815729 iter 40 value 93.797568 iter 50 value 92.971140 iter 60 value 87.729174 iter 70 value 87.120599 iter 80 value 86.406173 iter 90 value 85.906827 iter 100 value 85.767624 final value 85.767624 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 98.511458 iter 10 value 94.062808 iter 20 value 94.057250 iter 30 value 93.710074 iter 40 value 93.528086 iter 50 value 93.490614 iter 60 value 90.280817 iter 70 value 89.826257 iter 80 value 88.670152 iter 90 value 86.262894 iter 100 value 85.512295 final value 85.512295 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 96.756142 iter 10 value 93.900527 iter 20 value 87.459912 iter 30 value 85.974611 iter 40 value 85.221355 iter 50 value 85.170949 iter 60 value 85.158090 final value 85.157701 converged Fitting Repeat 1 # weights: 305 initial value 111.430712 iter 10 value 94.256061 iter 20 value 86.167336 iter 30 value 85.632363 iter 40 value 85.463720 iter 50 value 85.404368 iter 60 value 84.624890 iter 70 value 83.180808 iter 80 value 82.780036 iter 90 value 82.500575 iter 100 value 82.385244 final value 82.385244 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 104.432863 iter 10 value 95.956036 iter 20 value 94.574285 iter 30 value 90.574030 iter 40 value 85.370275 iter 50 value 84.699408 iter 60 value 83.535191 iter 70 value 83.341360 iter 80 value 82.893925 iter 90 value 82.625655 iter 100 value 82.529322 final value 82.529322 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 98.738990 iter 10 value 90.366747 iter 20 value 87.132557 iter 30 value 86.557292 iter 40 value 84.365256 iter 50 value 83.775997 iter 60 value 82.826762 iter 70 value 82.406456 iter 80 value 81.983877 iter 90 value 81.694216 iter 100 value 81.639272 final value 81.639272 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 102.257085 iter 10 value 94.436599 iter 20 value 86.365154 iter 30 value 85.249840 iter 40 value 84.972153 iter 50 value 83.762294 iter 60 value 83.255481 iter 70 value 83.143237 iter 80 value 82.899008 iter 90 value 82.570639 iter 100 value 82.204715 final value 82.204715 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 104.741748 iter 10 value 94.018556 iter 20 value 92.733547 iter 30 value 86.368469 iter 40 value 85.438431 iter 50 value 85.198947 iter 60 value 84.712456 iter 70 value 83.620417 iter 80 value 83.106787 iter 90 value 82.982107 iter 100 value 82.916043 final value 82.916043 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 102.580334 iter 10 value 97.143579 iter 20 value 90.282003 iter 30 value 85.139377 iter 40 value 84.853297 iter 50 value 84.058149 iter 60 value 83.389228 iter 70 value 82.338581 iter 80 value 82.094345 iter 90 value 81.846628 iter 100 value 81.723299 final value 81.723299 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 114.258791 iter 10 value 93.889800 iter 20 value 86.009715 iter 30 value 84.814558 iter 40 value 82.861651 iter 50 value 82.287880 iter 60 value 82.009839 iter 70 value 81.863130 iter 80 value 81.787912 iter 90 value 81.732850 iter 100 value 81.609235 final value 81.609235 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 110.524029 iter 10 value 94.331024 iter 20 value 88.816582 iter 30 value 85.870150 iter 40 value 85.678559 iter 50 value 85.282379 iter 60 value 84.935230 iter 70 value 84.388780 iter 80 value 83.605258 iter 90 value 83.049198 iter 100 value 82.423680 final value 82.423680 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 102.450730 iter 10 value 93.402868 iter 20 value 87.087107 iter 30 value 86.800717 iter 40 value 86.188776 iter 50 value 85.509344 iter 60 value 84.859809 iter 70 value 84.156827 iter 80 value 83.670528 iter 90 value 82.372496 iter 100 value 81.878157 final value 81.878157 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 117.454645 iter 10 value 94.467591 iter 20 value 88.157832 iter 30 value 85.980663 iter 40 value 84.399019 iter 50 value 83.142303 iter 60 value 82.642206 iter 70 value 81.857940 iter 80 value 81.580258 iter 90 value 81.527892 iter 100 value 81.476724 final value 81.476724 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 113.162829 iter 10 value 94.054817 iter 20 value 94.052924 iter 20 value 94.052924 iter 20 value 94.052924 final value 94.052924 converged Fitting Repeat 2 # weights: 103 initial value 96.186236 iter 10 value 89.357157 iter 20 value 84.625743 iter 30 value 84.620500 iter 40 value 84.332155 iter 50 value 83.770816 iter 60 value 83.337655 final value 83.337218 converged Fitting Repeat 3 # weights: 103 initial value 97.735126 final value 94.054783 converged Fitting Repeat 4 # weights: 103 initial value 98.736728 final value 94.055448 converged Fitting Repeat 5 # weights: 103 initial value 113.983687 final value 94.054580 converged Fitting Repeat 1 # weights: 305 initial value 102.973633 iter 10 value 94.058097 final value 94.053186 converged Fitting Repeat 2 # weights: 305 initial value 105.784861 iter 10 value 94.057650 iter 20 value 94.052952 final value 94.052950 converged Fitting Repeat 3 # weights: 305 initial value 107.244993 iter 10 value 94.058156 iter 20 value 93.999331 iter 30 value 92.833556 iter 40 value 92.806413 iter 50 value 92.805720 iter 60 value 92.698847 iter 70 value 92.698190 final value 92.698041 converged Fitting Repeat 4 # weights: 305 initial value 97.970050 iter 10 value 93.771278 iter 20 value 93.059865 iter 30 value 84.791749 iter 40 value 84.789235 iter 50 value 84.787955 iter 60 value 84.765476 iter 70 value 83.841330 iter 80 value 83.828057 iter 90 value 83.805450 iter 100 value 83.746263 final value 83.746263 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 106.734404 iter 10 value 94.057835 iter 20 value 94.049565 iter 30 value 87.828424 final value 87.824515 converged Fitting Repeat 1 # weights: 507 initial value 99.569769 iter 10 value 94.060315 iter 20 value 89.797642 iter 30 value 86.231920 iter 40 value 85.793256 final value 85.792372 converged Fitting Repeat 2 # weights: 507 initial value 103.752449 iter 10 value 94.059009 iter 20 value 94.029839 final value 93.912805 converged Fitting Repeat 3 # weights: 507 initial value 119.979006 iter 10 value 94.061630 iter 20 value 94.052997 iter 30 value 91.044510 iter 40 value 85.707833 iter 50 value 85.304106 iter 60 value 82.815966 iter 70 value 82.255557 iter 80 value 82.107739 iter 90 value 81.963719 iter 100 value 81.955278 final value 81.955278 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 103.247828 iter 10 value 93.017432 iter 20 value 92.885392 iter 30 value 92.881494 iter 40 value 86.608921 iter 50 value 86.560000 iter 60 value 86.424828 iter 70 value 86.422495 iter 80 value 84.469651 iter 90 value 84.407281 final value 84.407064 converged Fitting Repeat 5 # weights: 507 initial value 99.586214 iter 10 value 93.489974 iter 20 value 93.430874 iter 30 value 93.425103 iter 40 value 91.018554 final value 86.619600 converged Fitting Repeat 1 # weights: 103 initial value 95.384633 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 97.364105 iter 10 value 94.026559 final value 94.026542 converged Fitting Repeat 3 # weights: 103 initial value 96.391422 final value 94.026542 converged Fitting Repeat 4 # weights: 103 initial value 94.502459 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 95.420946 iter 10 value 94.028986 final value 94.026542 converged Fitting Repeat 1 # weights: 305 initial value 115.945029 final value 94.026542 converged Fitting Repeat 2 # weights: 305 initial value 101.455367 iter 10 value 94.265747 iter 20 value 94.264862 final value 94.264858 converged Fitting Repeat 3 # weights: 305 initial value 101.816517 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 95.298401 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 105.073045 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 106.950721 iter 10 value 93.143619 iter 20 value 89.658977 final value 89.656973 converged Fitting Repeat 2 # weights: 507 initial value 99.998745 iter 10 value 94.101715 iter 20 value 94.007925 final value 94.007667 converged Fitting Repeat 3 # weights: 507 initial value 95.355593 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 123.019039 iter 10 value 94.484211 iter 10 value 94.484211 iter 10 value 94.484211 final value 94.484211 converged Fitting Repeat 5 # weights: 507 initial value 112.554610 final value 94.484211 converged Fitting Repeat 1 # weights: 103 initial value 96.261530 iter 10 value 94.262760 iter 20 value 92.896392 iter 30 value 92.669362 iter 40 value 92.631560 final value 92.631296 converged Fitting Repeat 2 # weights: 103 initial value 99.772146 iter 10 value 94.488697 iter 20 value 94.390510 iter 30 value 94.215112 iter 40 value 93.490106 iter 50 value 91.769255 iter 60 value 89.300618 iter 70 value 89.017957 iter 80 value 88.645832 iter 90 value 84.079562 iter 100 value 82.918039 final value 82.918039 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 99.088761 iter 10 value 94.488509 iter 20 value 94.135677 iter 30 value 94.126019 iter 40 value 94.074490 iter 50 value 86.521557 iter 60 value 85.698545 iter 70 value 85.421537 iter 80 value 85.281912 iter 90 value 83.889273 iter 100 value 83.275067 final value 83.275067 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 98.129565 iter 10 value 94.461116 iter 20 value 93.335151 iter 30 value 93.260569 iter 40 value 93.211415 iter 50 value 93.067301 iter 60 value 89.802294 iter 70 value 88.198079 iter 80 value 87.495417 iter 90 value 85.895864 iter 100 value 85.105586 final value 85.105586 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 99.099351 iter 10 value 94.505957 iter 20 value 92.150079 iter 30 value 90.956304 iter 40 value 88.993458 iter 50 value 86.186731 iter 60 value 84.955620 iter 70 value 84.179751 iter 80 value 83.843577 iter 90 value 83.841877 final value 83.841852 converged Fitting Repeat 1 # weights: 305 initial value 123.366932 iter 10 value 94.620843 iter 20 value 94.535372 iter 30 value 89.389831 iter 40 value 88.097685 iter 50 value 84.684430 iter 60 value 83.218299 iter 70 value 82.273211 iter 80 value 81.901187 iter 90 value 81.619076 iter 100 value 81.525861 final value 81.525861 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 107.541137 iter 10 value 94.452977 iter 20 value 94.143778 iter 30 value 92.976214 iter 40 value 88.210775 iter 50 value 84.222261 iter 60 value 82.222411 iter 70 value 81.834062 iter 80 value 81.748586 iter 90 value 81.522831 iter 100 value 81.312549 final value 81.312549 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 103.759781 iter 10 value 94.204807 iter 20 value 89.335888 iter 30 value 86.667199 iter 40 value 84.709948 iter 50 value 83.897473 iter 60 value 83.758109 iter 70 value 83.730698 iter 80 value 83.302543 iter 90 value 82.680152 iter 100 value 81.711432 final value 81.711432 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 108.943766 iter 10 value 95.119257 iter 20 value 94.597230 iter 30 value 94.192194 iter 40 value 89.849328 iter 50 value 86.583509 iter 60 value 85.769728 iter 70 value 85.488359 iter 80 value 84.824253 iter 90 value 84.656293 iter 100 value 84.181913 final value 84.181913 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 122.697780 iter 10 value 94.627800 iter 20 value 89.575233 iter 30 value 85.529218 iter 40 value 85.199191 iter 50 value 84.918103 iter 60 value 84.862474 iter 70 value 84.747632 iter 80 value 84.593095 iter 90 value 84.073549 iter 100 value 83.982460 final value 83.982460 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 129.309511 iter 10 value 94.856316 iter 20 value 94.442890 iter 30 value 91.415555 iter 40 value 88.699152 iter 50 value 83.785993 iter 60 value 82.407296 iter 70 value 81.801913 iter 80 value 81.658048 iter 90 value 81.533365 iter 100 value 81.412137 final value 81.412137 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 119.579883 iter 10 value 94.323556 iter 20 value 86.839204 iter 30 value 85.983686 iter 40 value 85.650497 iter 50 value 85.336972 iter 60 value 84.885360 iter 70 value 82.942603 iter 80 value 81.674011 iter 90 value 81.345154 iter 100 value 81.254935 final value 81.254935 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 111.524782 iter 10 value 95.252074 iter 20 value 94.191625 iter 30 value 90.139833 iter 40 value 84.278636 iter 50 value 82.685911 iter 60 value 81.947780 iter 70 value 81.611590 iter 80 value 81.267007 iter 90 value 81.221259 iter 100 value 80.990898 final value 80.990898 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 133.560100 iter 10 value 94.402162 iter 20 value 91.055380 iter 30 value 87.073716 iter 40 value 83.767026 iter 50 value 82.863426 iter 60 value 82.225625 iter 70 value 82.100822 iter 80 value 81.837219 iter 90 value 81.673335 iter 100 value 81.412288 final value 81.412288 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 111.026833 iter 10 value 96.012856 iter 20 value 92.967480 iter 30 value 91.629587 iter 40 value 85.273614 iter 50 value 84.436730 iter 60 value 84.016118 iter 70 value 83.978494 iter 80 value 83.944418 iter 90 value 83.833390 iter 100 value 83.618662 final value 83.618662 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 114.992776 iter 10 value 94.038692 iter 20 value 94.028239 iter 30 value 93.937587 iter 40 value 89.042662 iter 50 value 88.832319 iter 60 value 88.740597 iter 70 value 88.301692 final value 88.301071 converged Fitting Repeat 2 # weights: 103 initial value 99.030735 iter 10 value 92.616427 iter 20 value 92.615636 iter 30 value 92.614913 iter 40 value 92.614713 iter 50 value 92.143430 iter 60 value 92.133010 iter 70 value 92.132886 final value 92.132861 converged Fitting Repeat 3 # weights: 103 initial value 97.946462 final value 94.485832 converged Fitting Repeat 4 # weights: 103 initial value 96.872719 final value 94.485813 converged Fitting Repeat 5 # weights: 103 initial value 97.776552 final value 94.486019 converged Fitting Repeat 1 # weights: 305 initial value 98.220132 iter 10 value 94.031816 iter 20 value 94.020492 iter 30 value 93.970103 iter 40 value 93.969657 final value 93.969590 converged Fitting Repeat 2 # weights: 305 initial value 108.155865 iter 10 value 94.031902 iter 20 value 94.025847 iter 30 value 93.970279 final value 93.969497 converged Fitting Repeat 3 # weights: 305 initial value 122.883601 iter 10 value 94.032015 iter 20 value 94.029854 iter 30 value 93.837447 iter 40 value 92.295028 iter 50 value 92.233624 final value 92.233542 converged Fitting Repeat 4 # weights: 305 initial value 97.914359 iter 10 value 94.489345 iter 20 value 94.182705 iter 30 value 84.732594 iter 40 value 84.730872 iter 50 value 84.579134 iter 60 value 84.557379 iter 70 value 84.478192 iter 80 value 84.474861 iter 90 value 83.645509 iter 100 value 82.771663 final value 82.771663 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 111.118847 iter 10 value 94.489201 iter 20 value 89.283297 final value 89.213100 converged Fitting Repeat 1 # weights: 507 initial value 106.230261 iter 10 value 94.053760 iter 20 value 94.038138 iter 30 value 93.969970 iter 40 value 93.964629 iter 50 value 86.243247 iter 60 value 83.235669 iter 70 value 82.803769 iter 80 value 82.769516 iter 90 value 82.764254 iter 100 value 82.289036 final value 82.289036 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 100.715434 iter 10 value 94.492437 iter 20 value 94.484553 iter 30 value 94.027005 final value 94.026958 converged Fitting Repeat 3 # weights: 507 initial value 97.916919 iter 10 value 93.438837 iter 20 value 93.431674 iter 30 value 92.912772 iter 40 value 92.865111 iter 50 value 92.863769 final value 92.863520 converged Fitting Repeat 4 # weights: 507 initial value 101.870875 iter 10 value 94.035442 iter 20 value 93.982849 iter 30 value 87.249547 iter 40 value 82.729931 iter 50 value 82.266345 iter 60 value 82.189857 iter 70 value 82.151901 iter 80 value 82.119187 iter 90 value 82.117247 iter 100 value 82.066130 final value 82.066130 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 109.145495 iter 10 value 94.493608 iter 20 value 94.485248 iter 30 value 87.011366 iter 40 value 86.122910 iter 50 value 85.846906 iter 60 value 85.841814 final value 85.838209 converged Fitting Repeat 1 # weights: 103 initial value 95.795896 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 101.757292 final value 93.904720 converged Fitting Repeat 3 # weights: 103 initial value 95.395834 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 110.030986 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 98.127201 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 103.029551 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 102.099108 final value 94.052910 converged Fitting Repeat 3 # weights: 305 initial value 98.358564 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 98.341023 iter 10 value 94.038791 final value 94.038251 converged Fitting Repeat 5 # weights: 305 initial value 110.643033 final value 94.052910 converged Fitting Repeat 1 # weights: 507 initial value 97.723412 final value 94.025289 converged Fitting Repeat 2 # weights: 507 initial value 98.373248 final value 93.890110 converged Fitting Repeat 3 # weights: 507 initial value 95.896780 final value 94.038251 converged Fitting Repeat 4 # weights: 507 initial value 95.250272 iter 10 value 94.028421 final value 94.027933 converged Fitting Repeat 5 # weights: 507 initial value 101.224587 final value 94.052910 converged Fitting Repeat 1 # weights: 103 initial value 102.070660 iter 10 value 94.056657 iter 20 value 91.853483 iter 30 value 88.164690 iter 40 value 85.866211 iter 50 value 85.186975 iter 60 value 84.784035 iter 70 value 84.041587 iter 80 value 83.815563 iter 90 value 83.561199 final value 83.550200 converged Fitting Repeat 2 # weights: 103 initial value 113.094764 iter 10 value 95.311025 iter 20 value 94.044921 iter 30 value 93.318988 iter 40 value 86.860210 iter 50 value 85.886590 iter 60 value 85.675159 iter 70 value 83.337776 iter 80 value 82.279046 iter 90 value 81.299188 iter 100 value 80.797317 final value 80.797317 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 104.973617 iter 10 value 94.134193 iter 20 value 93.763270 iter 30 value 88.660307 iter 40 value 87.351706 iter 50 value 87.037147 iter 60 value 85.030985 iter 70 value 84.459739 iter 80 value 83.682222 iter 90 value 83.551169 final value 83.550200 converged Fitting Repeat 4 # weights: 103 initial value 96.722442 iter 10 value 94.055194 iter 20 value 94.025865 iter 30 value 91.482588 iter 40 value 88.514242 iter 50 value 87.086787 iter 60 value 86.065674 iter 70 value 83.770087 iter 80 value 83.467506 iter 90 value 83.378515 iter 100 value 82.902232 final value 82.902232 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 117.253706 iter 10 value 94.102610 iter 20 value 94.056815 iter 30 value 94.010883 iter 40 value 87.823582 iter 50 value 87.075829 iter 60 value 86.620013 iter 70 value 86.472851 iter 80 value 86.306983 iter 90 value 83.637960 iter 100 value 83.619069 final value 83.619069 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 115.701048 iter 10 value 94.054867 iter 20 value 85.762296 iter 30 value 83.896581 iter 40 value 83.431669 iter 50 value 83.339702 iter 60 value 82.937696 iter 70 value 82.705149 iter 80 value 80.864105 iter 90 value 80.490553 iter 100 value 80.150002 final value 80.150002 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 108.159081 iter 10 value 94.052169 iter 20 value 88.515815 iter 30 value 85.151835 iter 40 value 84.979653 iter 50 value 84.363689 iter 60 value 81.371941 iter 70 value 81.316845 iter 80 value 81.190222 iter 90 value 81.073112 iter 100 value 80.859869 final value 80.859869 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 108.670208 iter 10 value 89.049470 iter 20 value 84.993593 iter 30 value 84.890408 iter 40 value 84.290361 iter 50 value 82.631955 iter 60 value 80.800688 iter 70 value 80.197557 iter 80 value 79.934422 iter 90 value 79.603464 iter 100 value 78.869149 final value 78.869149 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 104.965181 iter 10 value 92.898798 iter 20 value 87.753891 iter 30 value 84.618511 iter 40 value 84.161249 iter 50 value 83.868587 iter 60 value 83.823096 iter 70 value 83.717945 iter 80 value 83.637980 iter 90 value 83.256261 iter 100 value 80.966351 final value 80.966351 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 99.493970 iter 10 value 94.052555 iter 20 value 93.574645 iter 30 value 89.429206 iter 40 value 88.382327 iter 50 value 88.037415 iter 60 value 86.924903 iter 70 value 84.977021 iter 80 value 81.835512 iter 90 value 81.119153 iter 100 value 80.933195 final value 80.933195 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 103.449021 iter 10 value 97.106584 iter 20 value 88.342072 iter 30 value 84.668976 iter 40 value 82.418398 iter 50 value 81.800294 iter 60 value 81.381463 iter 70 value 81.254827 iter 80 value 81.100301 iter 90 value 80.812596 iter 100 value 79.997608 final value 79.997608 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 105.721711 iter 10 value 94.125261 iter 20 value 88.144172 iter 30 value 85.457933 iter 40 value 83.243288 iter 50 value 81.197974 iter 60 value 80.577886 iter 70 value 79.817237 iter 80 value 79.429304 iter 90 value 79.260552 iter 100 value 78.976273 final value 78.976273 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 127.143449 iter 10 value 94.101585 iter 20 value 93.496166 iter 30 value 90.022997 iter 40 value 83.533625 iter 50 value 80.496016 iter 60 value 79.694132 iter 70 value 79.333668 iter 80 value 79.269175 iter 90 value 79.147310 iter 100 value 79.097463 final value 79.097463 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 105.008470 iter 10 value 93.978723 iter 20 value 85.919653 iter 30 value 83.365149 iter 40 value 81.721461 iter 50 value 79.690778 iter 60 value 79.349201 iter 70 value 79.114835 iter 80 value 79.084636 iter 90 value 79.077543 iter 100 value 79.055244 final value 79.055244 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 110.411651 iter 10 value 94.001026 iter 20 value 89.104125 iter 30 value 85.641948 iter 40 value 82.421482 iter 50 value 81.515883 iter 60 value 80.484962 iter 70 value 80.152774 iter 80 value 79.913441 iter 90 value 79.557578 iter 100 value 79.293776 final value 79.293776 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 100.753798 final value 94.054440 converged Fitting Repeat 2 # weights: 103 initial value 98.655903 final value 94.054660 converged Fitting Repeat 3 # weights: 103 initial value 94.903477 iter 10 value 94.054605 iter 20 value 94.038580 final value 94.038577 converged Fitting Repeat 4 # weights: 103 initial value 94.986702 final value 94.054455 converged Fitting Repeat 5 # weights: 103 initial value 96.083219 final value 94.054518 converged Fitting Repeat 1 # weights: 305 initial value 109.833161 iter 10 value 94.042860 iter 20 value 92.970462 iter 30 value 90.530227 iter 40 value 82.397603 iter 50 value 80.307341 iter 60 value 79.214108 iter 70 value 79.067850 iter 80 value 79.057822 iter 90 value 78.819342 iter 100 value 78.383584 final value 78.383584 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 101.415137 iter 10 value 94.057546 iter 20 value 90.056182 iter 30 value 85.431783 iter 40 value 85.185336 iter 50 value 85.185192 iter 50 value 85.185191 iter 50 value 85.185191 final value 85.185191 converged Fitting Repeat 3 # weights: 305 initial value 95.324333 iter 10 value 94.056909 iter 20 value 93.967456 iter 30 value 84.571132 iter 40 value 84.355188 iter 50 value 84.352969 iter 60 value 84.351361 iter 70 value 84.329850 iter 80 value 82.192843 iter 90 value 81.978811 iter 100 value 81.978585 final value 81.978585 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 111.160893 iter 10 value 94.058567 iter 20 value 94.050055 final value 94.039415 converged Fitting Repeat 5 # weights: 305 initial value 103.706542 iter 10 value 94.043010 iter 20 value 94.021787 iter 30 value 90.302659 iter 40 value 84.316221 iter 50 value 84.217522 final value 84.217262 converged Fitting Repeat 1 # weights: 507 initial value 116.803008 iter 10 value 93.970435 iter 20 value 93.969751 iter 30 value 93.892101 iter 40 value 92.738124 iter 50 value 92.631294 iter 60 value 92.621618 iter 70 value 92.621380 final value 92.621378 converged Fitting Repeat 2 # weights: 507 initial value 106.903544 iter 10 value 93.969943 iter 20 value 93.963382 final value 93.963354 converged Fitting Repeat 3 # weights: 507 initial value 97.758461 iter 10 value 92.996198 iter 20 value 92.947377 iter 30 value 92.897379 iter 40 value 92.773093 iter 50 value 92.465222 iter 60 value 92.178751 iter 70 value 92.049637 iter 80 value 92.049492 iter 90 value 92.049322 final value 92.048796 converged Fitting Repeat 4 # weights: 507 initial value 96.337755 iter 10 value 92.846396 iter 20 value 92.713338 iter 30 value 92.239867 iter 40 value 92.190804 iter 50 value 92.130821 iter 60 value 92.126944 iter 70 value 92.123827 iter 70 value 92.123826 final value 92.123826 converged Fitting Repeat 5 # weights: 507 initial value 99.521364 iter 10 value 90.405183 iter 20 value 84.311234 iter 30 value 84.210631 iter 40 value 83.892018 iter 50 value 83.808802 iter 60 value 83.769301 iter 70 value 83.660560 iter 80 value 83.659170 iter 90 value 83.658361 iter 100 value 83.545581 final value 83.545581 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 144.839639 iter 10 value 117.211490 iter 20 value 116.894934 iter 30 value 108.655476 iter 40 value 108.529091 final value 108.529076 converged Fitting Repeat 2 # weights: 305 initial value 132.659330 iter 10 value 117.894937 iter 20 value 117.618047 iter 30 value 106.488196 iter 40 value 103.754839 iter 50 value 101.030543 final value 101.016599 converged Fitting Repeat 3 # weights: 305 initial value 135.015571 iter 10 value 117.913170 iter 20 value 117.571408 iter 30 value 115.668893 iter 40 value 115.241119 iter 50 value 115.237940 iter 60 value 114.189679 iter 70 value 114.149582 iter 80 value 109.735028 iter 90 value 107.124661 iter 100 value 107.010706 final value 107.010706 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 118.197547 iter 10 value 117.894941 iter 20 value 117.003497 iter 30 value 108.529270 final value 108.529265 converged Fitting Repeat 5 # weights: 305 initial value 123.904030 iter 10 value 108.243694 iter 20 value 105.366049 iter 30 value 105.359062 iter 40 value 105.336287 iter 50 value 104.235571 iter 60 value 104.027405 iter 70 value 102.003746 iter 80 value 100.082049 iter 90 value 99.477152 iter 100 value 99.416031 final value 99.416031 stopped after 100 iterations svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Tue Apr 11 21:02:01 2023 *********************************************** Number of test functions: 7 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures Number of test functions: 7 Number of errors: 0 Number of failures: 0 Warning messages: 1: `repeats` has no meaning for this resampling method. 2: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 42.332 2.168 85.267
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 34.810 | 0.568 | 35.379 | |
FreqInteractors | 0.235 | 0.012 | 0.247 | |
calculateAAC | 0.026 | 0.016 | 0.043 | |
calculateAutocor | 0.335 | 0.016 | 0.351 | |
calculateCTDC | 0.088 | 0.000 | 0.088 | |
calculateCTDD | 0.620 | 0.008 | 0.628 | |
calculateCTDT | 0.230 | 0.004 | 0.234 | |
calculateCTriad | 0.348 | 0.008 | 0.355 | |
calculateDC | 0.088 | 0.004 | 0.092 | |
calculateF | 0.291 | 0.004 | 0.294 | |
calculateKSAAP | 0.088 | 0.008 | 0.097 | |
calculateQD_Sm | 1.598 | 0.052 | 1.650 | |
calculateTC | 1.761 | 0.144 | 1.905 | |
calculateTC_Sm | 0.218 | 0.004 | 0.222 | |
corr_plot | 34.568 | 0.588 | 35.157 | |
enrichfindP | 0.449 | 0.013 | 51.136 | |
enrichfind_hp | 0.045 | 0.000 | 3.007 | |
enrichplot | 0.281 | 0.012 | 0.293 | |
filter_missing_values | 0.002 | 0.000 | 0.002 | |
getFASTA | 0.485 | 0.012 | 5.084 | |
getHPI | 0.001 | 0.000 | 0.001 | |
get_negativePPI | 0.002 | 0.000 | 0.002 | |
get_positivePPI | 0 | 0 | 0 | |
impute_missing_data | 0.000 | 0.002 | 0.002 | |
plotPPI | 0.069 | 0.005 | 0.074 | |
pred_ensembel | 14.111 | 0.676 | 11.030 | |
var_imp | 37.249 | 1.076 | 38.326 | |