Back to Build/check report for BioC 3.17 |
|
This page was generated on 2023-01-02 09:00:56 -0500 (Mon, 02 Jan 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
palomino5 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" | 4165 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the zlibbioc package: Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 2158/2158 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
zlibbioc 1.45.0 (landing page) Bioconductor Package Maintainer
| palomino5 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | ||||||||
Package: zlibbioc |
Version: 1.45.0 |
Command: rm -rf zlibbioc.buildbin-libdir && mkdir zlibbioc.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=zlibbioc.buildbin-libdir zlibbioc_1.45.0.tar.gz |
StartedAt: 2022-12-29 05:55:06 -0500 (Thu, 29 Dec 2022) |
EndedAt: 2022-12-29 05:55:15 -0500 (Thu, 29 Dec 2022) |
EllapsedTime: 9.3 seconds |
RetCode: 0 |
Status: OK |
PackageFile: zlibbioc_1.45.0.zip |
PackageFileSize: 154.3 KiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf zlibbioc.buildbin-libdir && mkdir zlibbioc.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=zlibbioc.buildbin-libdir zlibbioc_1.45.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'zlibbioc' ... ** using staged installation ********************************************** WARNING: this package has a configure script It probably needs manual configuration ********************************************** ** libs using C compiler: 'gcc.exe (GCC) 12.2.0' mkdir -p "F:/biocbuild/bbs-3.17-bioc-rtools43/meat/zlibbioc.buildbin-libdir/00LOCK-zlibbioc/00new/zlibbioc/include" "F:/biocbuild/bbs-3.17-bioc-rtools43/meat/zlibbioc.buildbin-libdir/00LOCK-zlibbioc/00new/zlibbioc/libs/x64" make -C zlib-1.2.5 -f"F:/biocbuild/bbs-3.17-bioc/R/etc/x64/Makeconf" -fwin32/Makefile.gcc libzbioc.a zlib1bioc.dll make[1]: Entering directory '/f/biocbuild/bbs-3.17-bioc-rtools43/tmpdir/RtmpQ7xqX4/R.INSTALLd4207c0a5ebc/zlibbioc/src/zlib-1.2.5' win32/Makefile.gcc:90: warning: overriding recipe for target '.c.o' F:/biocbuild/bbs-3.17-bioc/R/etc/x64/Makeconf:257: warning: ignoring old recipe for target '.c.o' gcc -m64 -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o adler32.o adler32.c gcc -m64 -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o compress.o compress.c gcc -m64 -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o crc32.o crc32.c gcc -m64 -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o deflate.o deflate.c gcc -m64 -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o gzclose.o gzclose.c gcc -m64 -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o gzlib.o gzlib.c gcc -m64 -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o gzread.o gzread.c gcc -m64 -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o gzwrite.o gzwrite.c gcc -m64 -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o infback.o infback.c gcc -m64 -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o inffast.o inffast.c gcc -m64 -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o inflate.o inflate.c gcc -m64 -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o inftrees.o inftrees.c gcc -m64 -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o trees.o trees.c gcc -m64 -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o uncompr.o uncompr.c gcc -m64 -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o zutil.o zutil.c ar rcs libzbioc.a adler32.o compress.o crc32.o deflate.o gzclose.o gzlib.o gzread.o gzwrite.o infback.o inffast.o inflate.o inftrees.o trees.o uncompr.o zutil.o windres --define GCC_WINDRES --target=pe-x86-64 -o zlibrc.o win32/zlib1.rc gcc -m64 -shared -Wl,--out-implib,libzbiocdll.a \ -o zlib1bioc.dll win32/zlib.def adler32.o compress.o crc32.o deflate.o gzclose.o gzlib.o gzread.o gzwrite.o infback.o inffast.o inflate.o inftrees.o trees.o uncompr.o zutil.o zlibrc.o strip zlib1bioc.dll make[1]: Leaving directory '/f/biocbuild/bbs-3.17-bioc-rtools43/tmpdir/RtmpQ7xqX4/R.INSTALLd4207c0a5ebc/zlibbioc/src/zlib-1.2.5' cp zlib-1.2.5/libzbioc.a zlib-1.2.5/zlib1bioc.dll \ "F:/biocbuild/bbs-3.17-bioc-rtools43/meat/zlibbioc.buildbin-libdir/00LOCK-zlibbioc/00new/zlibbioc/libs/x64" cp zlib-1.2.5/zconf.h zlib-1.2.5/zlib.h "F:/biocbuild/bbs-3.17-bioc-rtools43/meat/zlibbioc.buildbin-libdir/00LOCK-zlibbioc/00new/zlibbioc/include" gcc -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c R_init_zlibbioc.c -o R_init_zlibbioc.o gcc -shared -s -static-libgcc -o zlibbioc.dll tmp.def R_init_zlibbioc.o -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR installing to F:/biocbuild/bbs-3.17-bioc-rtools43/meat/zlibbioc.buildbin-libdir/00LOCK-zlibbioc/00new/zlibbioc/libs/x64 ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'zlibbioc' as zlibbioc_1.45.0.zip * DONE (zlibbioc)