Back to Build/check report for BioC 3.17
ABCDEFGHIJKLMNOPQ[R]STUVWXYZ

This page was generated on 2023-01-02 09:00:46 -0500 (Mon, 02 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
palomino5Windows Server 2022 Datacenterx64R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" 4165
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

CHECK results for RCX on palomino5


To the developers/maintainers of the RCX package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1602/2158HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RCX 1.3.1  (landing page)
Florian Auer
Snapshot Date: 2022-12-28 11:00:06 -0500 (Wed, 28 Dec 2022)
git_url: https://git.bioconductor.org/packages/RCX
git_branch: master
git_last_commit: 45af4be
git_last_commit_date: 2022-12-23 06:20:06 -0500 (Fri, 23 Dec 2022)
palomino5Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  

Summary

Package: RCX
Version: 1.3.1
Command: F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:RCX.install-out.txt --library=F:\biocbuild\bbs-3.17-bioc\R\library --no-vignettes --timings RCX_1.3.1.tar.gz
StartedAt: 2022-12-29 02:40:15 -0500 (Thu, 29 Dec 2022)
EndedAt: 2022-12-29 02:41:05 -0500 (Thu, 29 Dec 2022)
EllapsedTime: 49.3 seconds
RetCode: 0
Status:   OK  
CheckDir: RCX.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:RCX.install-out.txt --library=F:\biocbuild\bbs-3.17-bioc\R\library --no-vignettes --timings RCX_1.3.1.tar.gz
###
##############################################################################
##############################################################################


* using log directory 'F:/biocbuild/bbs-3.17-bioc-rtools43/meat/RCX.Rcheck'
* using R Under development (unstable) (2022-12-25 r83502 ucrt)
* using platform: x86_64-w64-mingw32 (64-bit)
* R was compiled by
    gcc.exe (GCC) 10.4.0
    GNU Fortran (GCC) 10.4.0
* running under: Windows Server x64 (build 20348)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'RCX/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'RCX' version '1.3.1'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'RCX' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... NOTE
Problems with news in 'NEWS.md':
No news entries found.
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking R/sysdata.rda ... OK
* checking files in 'vignettes' ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
  Running 'testthat.R'
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  'F:/biocbuild/bbs-3.17-bioc-rtools43/meat/RCX.Rcheck/00check.log'
for details.



Installation output

RCX.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL RCX
###
##############################################################################
##############################################################################


* installing to library 'F:/biocbuild/bbs-3.17-bioc/R/library'
* installing *source* package 'RCX' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (RCX)

Tests output

RCX.Rcheck/tests/testthat.Rout


R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences"
Copyright (C) 2022 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64 (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(RCX)
> 
> test_check("RCX")
$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
 "NetworkAttributesAspect"    "CartesianLayoutAspect" 
                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
 "NetworkAttributesAspect"    "CartesianLayoutAspect" 
                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
 "NetworkAttributesAspect"    "CartesianLayoutAspect" 
                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
 "NetworkAttributesAspect"    "CartesianLayoutAspect" 
                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
 "NetworkAttributesAspect"    "CartesianLayoutAspect" 
                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
 "NetworkAttributesAspect"    "CartesianLayoutAspect" 
                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
 "NetworkAttributesAspect"    "CartesianLayoutAspect" 
                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
 "NetworkAttributesAspect"    "CartesianLayoutAspect" 
                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
 "NetworkAttributesAspect"    "CartesianLayoutAspect" 
                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
 "NetworkAttributesAspect"    "CartesianLayoutAspect" 
                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
 "NetworkAttributesAspect"    "CartesianLayoutAspect" 
                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
 "NetworkAttributesAspect"    "CartesianLayoutAspect" 
                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
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            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
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                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
 "NetworkAttributesAspect"    "CartesianLayoutAspect" 
                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
 "NetworkAttributesAspect"    "CartesianLayoutAspect" 
                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
 "NetworkAttributesAspect"    "CartesianLayoutAspect" 
                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
 "NetworkAttributesAspect"    "CartesianLayoutAspect" 
                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
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         networkAttributes            cartesianLayout 
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                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
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             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
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$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
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            nodeAttributes             edgeAttributes 
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         networkAttributes            cartesianLayout 
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                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
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                  cyGroups         cyVisualProperties 
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        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
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            nodeAttributes             edgeAttributes 
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         networkAttributes            cartesianLayout 
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                  cyGroups         cyVisualProperties 
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        cyHiddenAttributes         cyNetworkRelations 
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             cySubNetworks              cyTableColumn 
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$extensions
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$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
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            nodeAttributes             edgeAttributes 
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         networkAttributes            cartesianLayout 
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                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
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         networkAttributes            cartesianLayout 
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                  cyGroups         cyVisualProperties 
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        cyHiddenAttributes         cyNetworkRelations 
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             cySubNetworks              cyTableColumn 
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$extensions
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                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
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$extensions
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$extensions
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$extensions
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$extensions
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$extensions
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                  cyGroups         cyVisualProperties 
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$extensions
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                  cyGroups         cyVisualProperties 
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             cySubNetworks              cyTableColumn 
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$extensions
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    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
 "NetworkAttributesAspect"    "CartesianLayoutAspect" 
                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
 "NetworkAttributesAspect"    "CartesianLayoutAspect" 
                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
 "NetworkAttributesAspect"    "CartesianLayoutAspect" 
                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

$aspectClasses
                       rcx                   metaData 
                     "RCX"           "MetaDataAspect" 
                     nodes                      edges 
             "NodesAspect"              "EdgesAspect" 
            nodeAttributes             edgeAttributes 
    "NodeAttributesAspect"     "EdgeAttributesAspect" 
         networkAttributes            cartesianLayout 
 "NetworkAttributesAspect"    "CartesianLayoutAspect" 
                  cyGroups         cyVisualProperties 
          "CyGroupsAspect" "CyVisualPropertiesAspect" 
        cyHiddenAttributes         cyNetworkRelations 
"CyHiddenAttributesAspect" "CyNetworkRelationsAspect" 
             cySubNetworks              cyTableColumn 
     "CySubNetworksAspect"      "CyTableColumnAspect" 

$extensions
list()

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 60 ]
> 
> proc.time()
   user  system elapsed 
   2.12    0.20    2.32 

Example timings

RCX.Rcheck/RCX-Ex.timings

nameusersystemelapsed
CartesianLayout000
Convert-Names-and-Classes000
CyGroups000
CyHiddenAttributes0.090.000.10
CyNetworkRelations000
CySubNetworks000
CyTableColumn0.020.000.01
CyVisualProperties0.010.000.02
CyVisualProperty000
CyVisualPropertyDependencies0.020.000.01
CyVisualPropertyMappings000
CyVisualPropertyProperties000
EdgeAttributes0.020.000.02
Edges000
Igraph1.810.031.84
Meta-data0.030.000.03
NetworkAttributes000
NodeAttributes000
Nodes0.010.000.01
RCX-object0.170.000.18
aspectClasses000
checks000
convert-data-types-and-values000
convert2json000
countElements0.020.000.01
custom-print000
dot-addAspectNameToJson000
dot-addAttributeData000
dot-aspectClass000
dot-convertRawList000
dot-createAttributeAspect000
dot-createCyVpPorD000
dot-filterBy000
dot-format000
dot-infer000
dot-json2RDataType000
dot-jsonL000
dot-jsonV000
dot-log000
dot-mergeAttributesAspect000
dot-mergeIdAspect000
dot-modClass000
dot-pasteC000
dot-renameDF000
dot-stop000
dot-summaryAspect000
dot-transformListLength-set000
dot-transformVLD000
getCyVisualProperty0.020.000.02
graphNEL1.950.021.97
hasIds000
idProperty000
jsonToRCX000
markAttributeColumn000
markRefColumn000
maxId000
rcxToJson000
readCX0.360.000.36
referredBy000
refersTo000
setExtension000
summary000
toCX0.020.000.01
updateCartesianLayout0.030.000.04
updateCyGroups0.030.000.03
updateCyHiddenAttributes0.030.000.03
updateCyNetworkRelations0.030.000.03
updateCySubNetworks0.040.000.03
updateCyTableColumn0.030.000.03
updateCyVisualProperties0.170.010.19
updateCyVisualProperty0.050.000.05
updateEdgeAttributes0.040.000.04
updateEdges0.020.000.02
updateMetaDataProperties0.010.000.01
updateNetworkAttributes0.050.000.05
updateNodeAttributes0.050.000.05
updateNodes0.010.000.01
validate0.190.000.19
visualize0.020.000.02
writeCX000
writeHTML0.200.031.07