Back to Multiple platform build/check report for BioC 3.16: simplified long |
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This page was generated on 2023-04-12 11:06:10 -0400 (Wed, 12 Apr 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | 4.2.3 (2023-03-15) -- "Shortstop Beagle" | 4502 |
palomino4 | Windows Server 2022 Datacenter | x64 | 4.2.3 (2023-03-15 ucrt) -- "Shortstop Beagle" | 4282 |
lconway | macOS 12.5.1 Monterey | x86_64 | 4.2.3 (2023-03-15) -- "Shortstop Beagle" | 4310 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the graper package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 854/2183 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
graper 1.14.2 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | OK | OK | OK | |||||||||
palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
lconway | macOS 12.5.1 Monterey / x86_64 | OK | OK | OK | OK | |||||||||
Package: graper |
Version: 1.14.2 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.14.2.tar.gz |
StartedAt: 2023-04-10 20:31:56 -0400 (Mon, 10 Apr 2023) |
EndedAt: 2023-04-10 20:32:56 -0400 (Mon, 10 Apr 2023) |
EllapsedTime: 60.2 seconds |
RetCode: 0 |
Status: OK |
CheckDir: graper.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.14.2.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/Users/biocbuild/bbs-3.16-bioc/meat/graper.Rcheck’ * using R version 4.2.3 (2023-03-15) * using platform: x86_64-apple-darwin17.0 (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘graper/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘graper’ version ‘1.14.2’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘graper’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking compiled code ... NOTE Note: information on .o files is not available * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 1 NOTE See ‘/Users/biocbuild/bbs-3.16-bioc/meat/graper.Rcheck/00check.log’ for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.2/Resources/library’ * installing *source* package ‘graper’ ... ** using staged installation ** libs clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/BH/include' -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/BH/include' -I/usr/local/include -fPIC -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -mmacosx-version-min=10.13 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin18/8.2.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation ld: warning: dylib (/usr/local/gfortran/lib/libgfortran.dylib) was built for newer macOS version (10.14) than being linked (10.13) ld: warning: dylib (/usr/local/gfortran/lib/libquadmath.dylib) was built for newer macOS version (10.14) than being linked (10.13) installing to /Library/Frameworks/R.framework/Versions/4.2/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.2.3 (2023-03-15) -- "Shortstop Beagle" Copyright (C) 2023 The R Foundation for Statistical Computing Platform: x86_64-apple-darwin17.0 (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(graper) > > test_check("graper") iteration 1 Updating parameters of variational distributions... Calculating ELB.. ELB=-858.051 ELB improved by inf iteration 2 Updating parameters of variational distributions... Calculating ELB.. ELB=-586.243 ELB improved by 271.809 iteration 3 Updating parameters of variational distributions... Calculating ELB.. ELB=-523.878 ELB improved by 62.3647 iteration 4 Updating parameters of variational distributions... Calculating ELB.. ELB=-481.009 ELB improved by 42.8687 iteration 5 Updating parameters of variational distributions... Calculating ELB.. ELB=-462.275 ELB improved by 18.7341 iteration 6 Updating parameters of variational distributions... Calculating ELB.. ELB=-455.183 ELB improved by 7.09249 iteration 7 Updating parameters of variational distributions... Calculating ELB.. ELB=-451.39 ELB improved by 3.79265 iteration 8 Updating parameters of variational distributions... Calculating ELB.. ELB=-448.667 ELB improved by 2.72341 iteration 9 Updating parameters of variational distributions... Calculating ELB.. ELB=-446.335 ELB improved by 2.33177 iteration 10 Updating parameters of variational distributions... Calculating ELB.. ELB=-444.201 ELB improved by 2.13367 iteration 11 Updating parameters of variational distributions... Calculating ELB.. ELB=-442.225 ELB improved by 1.97629 iteration 12 Updating parameters of variational distributions... Calculating ELB.. ELB=-440.418 ELB improved by 1.80634 iteration 13 Updating parameters of variational distributions... Calculating ELB.. ELB=-438.808 ELB improved by 1.61043 iteration 14 Updating parameters of variational distributions... Calculating ELB.. ELB=-437.413 ELB improved by 1.39461 iteration 15 Updating parameters of variational distributions... Calculating ELB.. ELB=-436.239 ELB improved by 1.17411 iteration 16 Updating parameters of variational distributions... Calculating ELB.. ELB=-435.273 ELB improved by 0.966015 iteration 17 Updating parameters of variational distributions... Calculating ELB.. ELB=-434.49 ELB improved by 0.783537 iteration 18 Updating parameters of variational distributions... Calculating ELB.. ELB=-433.857 ELB improved by 0.633138 iteration 19 Updating parameters of variational distributions... Calculating ELB.. ELB=-433.342 ELB improved by 0.514836 iteration 20 Updating parameters of variational distributions... Calculating ELB.. ELB=-432.917 ELB improved by 0.424338 iteration 21 Updating parameters of variational distributions... Calculating ELB.. ELB=-432.562 ELB improved by 0.355457 iteration 22 Updating parameters of variational distributions... Calculating ELB.. ELB=-432.26 ELB improved by 0.302098 iteration 23 Updating parameters of variational distributions... Calculating ELB.. ELB=-432 ELB improved by 0.259491 iteration 24 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.776 ELB improved by 0.224483 iteration 25 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.581 ELB improved by 0.195178 iteration 26 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.41 ELB improved by 0.170434 iteration 27 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.261 ELB improved by 0.149504 iteration 28 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.129 ELB improved by 0.131827 iteration 29 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.012 ELB improved by 0.116937 iteration 30 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.908 ELB improved by 0.104418 iteration 31 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.814 ELB improved by 0.0938949 iteration 32 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.729 ELB improved by 0.0850335 iteration 33 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.651 ELB improved by 0.0775471 iteration 34 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.58 ELB improved by 0.0711961 iteration 35 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.514 ELB improved by 0.0657845 iteration 36 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.453 ELB improved by 0.0611546 iteration 37 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.396 ELB improved by 0.0571803 iteration 38 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.342 ELB improved by 0.0537611 iteration 39 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.291 ELB improved by 0.0508164 iteration 40 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.243 ELB improved by 0.0482811 iteration 41 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.197 ELB improved by 0.0461026 iteration 42 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.153 ELB improved by 0.0442379 iteration 43 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.11 ELB improved by 0.0426515 iteration 44 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.069 ELB improved by 0.0413142 iteration 45 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.029 ELB improved by 0.0402018 iteration 46 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.989 ELB improved by 0.0392941 iteration 47 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.951 ELB improved by 0.0385747 iteration 48 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.913 ELB improved by 0.0380297 iteration 49 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.875 ELB improved by 0.0376482 iteration 50 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.838 ELB improved by 0.0374212 iteration 51 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.8 ELB improved by 0.0373421 iteration 52 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.763 ELB improved by 0.0374058 iteration 53 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.725 ELB improved by 0.037609 iteration 54 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.687 ELB improved by 0.0379501 iteration 55 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.649 ELB improved by 0.0384292 iteration 56 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.61 ELB improved by 0.0390479 iteration 57 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.57 ELB improved by 0.0398095 iteration 58 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.529 ELB improved by 0.0407187 iteration 59 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.487 ELB improved by 0.0417825 iteration 60 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.444 ELB improved by 0.0430093 iteration 61 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.4 ELB improved by 0.0444096 iteration 62 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.354 ELB improved by 0.0459961 iteration 63 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.306 ELB improved by 0.0477835 iteration 64 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.256 ELB improved by 0.0497891 iteration 65 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.204 ELB improved by 0.0520321 iteration 66 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.15 ELB improved by 0.0545342 iteration 67 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.093 ELB improved by 0.0573194 iteration 68 Updating parameters of variational distributions... Calculating ELB.. ELB=-429.032 ELB improved by 0.0604131 iteration 69 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.968 ELB improved by 0.0638425 iteration 70 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.901 ELB improved by 0.067635 iteration 71 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.829 ELB improved by 0.0718174 iteration 72 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.752 ELB improved by 0.0764144 iteration 73 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.671 ELB improved by 0.0814459 iteration 74 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.584 ELB improved by 0.0869246 iteration 75 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.491 ELB improved by 0.0928522 iteration 76 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.392 ELB improved by 0.0992154 iteration 77 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.286 ELB improved by 0.105981 iteration 78 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.173 ELB improved by 0.113089 iteration 79 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.052 ELB improved by 0.120452 iteration 80 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.925 ELB improved by 0.127946 iteration 81 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.789 ELB improved by 0.135415 iteration 82 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.646 ELB improved by 0.142666 iteration 83 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.497 ELB improved by 0.14948 iteration 84 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.341 ELB improved by 0.155618 iteration 85 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.181 ELB improved by 0.160828 iteration 86 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.016 ELB improved by 0.16485 iteration 87 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.848 ELB improved by 0.167407 iteration 88 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.68 ELB improved by 0.168205 iteration 89 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.513 ELB improved by 0.166946 iteration 90 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.35 ELB improved by 0.163393 iteration 91 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.192 ELB improved by 0.157491 iteration 92 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.043 ELB improved by 0.149487 iteration 93 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.903 ELB improved by 0.139973 iteration 94 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.773 ELB improved by 0.129789 iteration 95 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.653 ELB improved by 0.119877 iteration 96 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.542 ELB improved by 0.111169 iteration 97 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.437 ELB improved by 0.10457 iteration 98 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.336 ELB improved by 0.10101 iteration 99 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.235 ELB improved by 0.101409 iteration 100 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.129 ELB improved by 0.106293 iteration 101 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.014 ELB improved by 0.114678 iteration 102 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.891 ELB improved by 0.122594 iteration 103 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.768 ELB improved by 0.123839 iteration 104 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.653 ELB improved by 0.114877 iteration 105 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.554 ELB improved by 0.0983299 iteration 106 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.475 ELB improved by 0.0797425 iteration 107 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.412 ELB improved by 0.0630845 iteration 108 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.362 ELB improved by 0.0497904 iteration 109 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.322 ELB improved by 0.0397486 iteration 110 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.29 ELB improved by 0.0322856 iteration 111 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.263 ELB improved by 0.0266932 iteration 112 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.241 ELB improved by 0.022412 iteration 113 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.222 ELB improved by 0.0190511 iteration 114 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.205 ELB improved by 0.0163511 iteration 115 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.191 ELB improved by 0.0141425 iteration 116 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.179 ELB improved by 0.0123122 iteration 117 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.168 ELB improved by 0.010782 iteration 118 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.158 ELB improved by 0.00949518 ELB converged iteration 1 Updating parameters of variational distributions... Calculating ELB.. ELB=-811.446 ELB improved by inf iteration 2 Updating parameters of variational distributions... Calculating ELB.. ELB=-588.338 ELB improved by 223.107 iteration 3 Updating parameters of variational distributions... Calculating ELB.. ELB=-527.863 ELB improved by 60.4755 iteration 4 Updating parameters of variational distributions... Calculating ELB.. ELB=-474.668 ELB improved by 53.1954 iteration 5 Updating parameters of variational distributions... Calculating ELB.. ELB=-441.173 ELB improved by 33.4946 iteration 6 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.072 ELB improved by 14.1005 iteration 7 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.88 ELB improved by 6.1924 iteration 8 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.924 ELB improved by 3.95588 iteration 9 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.836 ELB improved by 3.08768 iteration 10 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.101 ELB improved by 2.73588 iteration 11 Updating parameters of variational distributions... Calculating ELB.. ELB=-408.45 ELB improved by 2.65063 iteration 12 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.719 ELB improved by 2.73144 iteration 13 Updating parameters of variational distributions... Calculating ELB.. ELB=-402.775 ELB improved by 2.9438 iteration 14 Updating parameters of variational distributions... Calculating ELB.. ELB=-399.502 ELB improved by 3.27255 iteration 15 Updating parameters of variational distributions... Calculating ELB.. ELB=-395.829 ELB improved by 3.67337 iteration 16 Updating parameters of variational distributions... Calculating ELB.. ELB=-391.813 ELB improved by 4.01554 iteration 17 Updating parameters of variational distributions... Calculating ELB.. ELB=-387.748 ELB improved by 4.06504 iteration 18 Updating parameters of variational distributions... Calculating ELB.. ELB=-384.096 ELB improved by 3.65249 iteration 19 Updating parameters of variational distributions... Calculating ELB.. ELB=-381.171 ELB improved by 2.92494 iteration 20 Updating parameters of variational distributions... Calculating ELB.. ELB=-378.937 ELB improved by 2.23335 iteration 21 Updating parameters of variational distributions... Calculating ELB.. ELB=-377.176 ELB improved by 1.76118 iteration 22 Updating parameters of variational distributions... Calculating ELB.. ELB=-375.744 ELB improved by 1.43269 iteration 23 Updating parameters of variational distributions... Calculating ELB.. ELB=-374.524 ELB improved by 1.21971 iteration 24 Updating parameters of variational distributions... Calculating ELB.. ELB=-373.367 ELB improved by 1.15735 iteration 25 Updating parameters of variational distributions... Calculating ELB.. ELB=-372.174 ELB improved by 1.19237 iteration 26 Updating parameters of variational distributions... Calculating ELB.. ELB=-370.919 ELB improved by 1.25484 iteration 27 Updating parameters of variational distributions... Calculating ELB.. ELB=-369.592 ELB improved by 1.32755 iteration 28 Updating parameters of variational distributions... Calculating ELB.. ELB=-368.171 ELB improved by 1.42092 iteration 29 Updating parameters of variational distributions... Calculating ELB.. ELB=-366.631 ELB improved by 1.53993 iteration 30 Updating parameters of variational distributions... Calculating ELB.. ELB=-364.937 ELB improved by 1.69351 iteration 31 Updating parameters of variational distributions... Calculating ELB.. ELB=-363.019 ELB improved by 1.91842 iteration 32 Updating parameters of variational distributions... Calculating ELB.. ELB=-360.695 ELB improved by 2.32428 iteration 33 Updating parameters of variational distributions... Calculating ELB.. ELB=-357.675 ELB improved by 3.01989 iteration 34 Updating parameters of variational distributions... Calculating ELB.. ELB=-353.911 ELB improved by 3.76423 iteration 35 Updating parameters of variational distributions... Calculating ELB.. ELB=-350.238 ELB improved by 3.67227 iteration 36 Updating parameters of variational distributions... Calculating ELB.. ELB=-347.839 ELB improved by 2.39933 iteration 37 Updating parameters of variational distributions... Calculating ELB.. ELB=-346.524 ELB improved by 1.31513 iteration 38 Updating parameters of variational distributions... Calculating ELB.. ELB=-345.832 ELB improved by 0.691733 iteration 39 Updating parameters of variational distributions... Calculating ELB.. ELB=-345.454 ELB improved by 0.377864 iteration 40 Updating parameters of variational distributions... Calculating ELB.. ELB=-345.23 ELB improved by 0.22422 iteration 41 Updating parameters of variational distributions... Calculating ELB.. ELB=-345.085 ELB improved by 0.144983 iteration 42 Updating parameters of variational distributions... Calculating ELB.. ELB=-344.985 ELB improved by 0.0999757 iteration 43 Updating parameters of variational distributions... Calculating ELB.. ELB=-344.913 ELB improved by 0.0718776 iteration 44 Updating parameters of variational distributions... Calculating ELB.. ELB=-344.86 ELB improved by 0.053197 iteration 45 Updating parameters of variational distributions... Calculating ELB.. ELB=-344.82 ELB improved by 0.0403515 iteration 46 Updating parameters of variational distributions... Calculating ELB.. ELB=-344.788 ELB improved by 0.0313376 iteration 47 Updating parameters of variational distributions... Calculating ELB.. ELB=-344.763 ELB improved by 0.024898 iteration 48 Updating parameters of variational distributions... Calculating ELB.. ELB=-344.743 ELB improved by 0.0202076 iteration 49 Updating parameters of variational distributions... Calculating ELB.. ELB=-344.727 ELB improved by 0.01672 iteration 50 Updating parameters of variational distributions... Calculating ELB.. ELB=-344.712 ELB improved by 0.0140728 iteration 51 Updating parameters of variational distributions... Calculating ELB.. ELB=-344.7 ELB improved by 0.0120239 iteration 52 Updating parameters of variational distributions... Calculating ELB.. ELB=-344.69 ELB improved by 0.0104095 iteration 53 Updating parameters of variational distributions... Calculating ELB.. ELB=-344.681 ELB improved by 0.00911679 ELB converged iteration 1 Updating parameters of variational distributions... Calculating ELB.. ELB=-880.574 ELB improved by inf iteration 2 Updating parameters of variational distributions... Calculating ELB.. ELB=-596.524 ELB improved by 284.05 iteration 3 Updating parameters of variational distributions... Calculating ELB.. ELB=-532.903 ELB improved by 63.6215 iteration 4 Updating parameters of variational distributions... Calculating ELB.. ELB=-488.214 ELB improved by 44.6881 iteration 5 Updating parameters of variational distributions... Calculating ELB.. ELB=-467.131 ELB improved by 21.0834 iteration 6 Updating parameters of variational distributions... Calculating ELB.. ELB=-458.82 ELB improved by 8.3108 iteration 7 Updating parameters of variational distributions... Calculating ELB.. ELB=-454.161 ELB improved by 4.65942 iteration 8 Updating parameters of variational distributions... Calculating ELB.. ELB=-450.347 ELB improved by 3.81427 iteration 9 Updating parameters of variational distributions... Calculating ELB.. ELB=-446.682 ELB improved by 3.6642 iteration 10 Updating parameters of variational distributions... Calculating ELB.. ELB=-442.956 ELB improved by 3.72586 iteration 11 Updating parameters of variational distributions... Calculating ELB.. ELB=-439.102 ELB improved by 3.85494 iteration 12 Updating parameters of variational distributions... Calculating ELB.. ELB=-435.161 ELB improved by 3.94023 iteration 13 Updating parameters of variational distributions... Calculating ELB.. ELB=-431.334 ELB improved by 3.82727 iteration 14 Updating parameters of variational distributions... Calculating ELB.. ELB=-427.943 ELB improved by 3.39097 iteration 15 Updating parameters of variational distributions... Calculating ELB.. ELB=-425.254 ELB improved by 2.68905 iteration 16 Updating parameters of variational distributions... Calculating ELB.. ELB=-423.311 ELB improved by 1.94268 iteration 17 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.976 ELB improved by 1.33512 iteration 18 Updating parameters of variational distributions... Calculating ELB.. ELB=-421.059 ELB improved by 0.917003 iteration 19 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.404 ELB improved by 0.654753 iteration 20 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.91 ELB improved by 0.493954 iteration 21 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.519 ELB improved by 0.391905 iteration 22 Updating parameters of variational distributions... Calculating ELB.. ELB=-419.196 ELB improved by 0.323009 iteration 23 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.922 ELB improved by 0.273508 iteration 24 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.686 ELB improved by 0.236122 iteration 25 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.479 ELB improved by 0.206832 iteration 26 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.296 ELB improved by 0.183214 iteration 27 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.132 ELB improved by 0.163633 iteration 28 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.985 ELB improved by 0.146861 iteration 29 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.853 ELB improved by 0.13195 iteration 30 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.735 ELB improved by 0.118242 iteration 31 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.63 ELB improved by 0.105438 iteration 32 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.536 ELB improved by 0.0935799 iteration 33 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.453 ELB improved by 0.0829038 iteration 34 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.38 ELB improved by 0.0736229 iteration 35 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.314 ELB improved by 0.0657905 iteration 36 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.255 ELB improved by 0.059291 iteration 37 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.201 ELB improved by 0.053913 iteration 38 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.151 ELB improved by 0.0494287 iteration 39 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.106 ELB improved by 0.0456404 iteration 40 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.063 ELB improved by 0.0423953 iteration 41 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.024 ELB improved by 0.0395815 iteration 42 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.987 ELB improved by 0.0371183 iteration 43 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.952 ELB improved by 0.0349468 iteration 44 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.919 ELB improved by 0.0330227 iteration 45 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.887 ELB improved by 0.0313115 iteration 46 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.857 ELB improved by 0.0297854 iteration 47 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.829 ELB improved by 0.0284215 iteration 48 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.802 ELB improved by 0.0272005 iteration 49 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.776 ELB improved by 0.0261055 iteration 50 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.751 ELB improved by 0.0251222 iteration 51 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.726 ELB improved by 0.024238 iteration 52 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.703 ELB improved by 0.0234415 iteration 53 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.68 ELB improved by 0.0227229 iteration 54 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.658 ELB improved by 0.0220735 iteration 55 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.637 ELB improved by 0.0214851 iteration 56 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.616 ELB improved by 0.0209508 iteration 57 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.595 ELB improved by 0.0204641 iteration 58 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.575 ELB improved by 0.0200193 iteration 59 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.556 ELB improved by 0.019611 iteration 60 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.536 ELB improved by 0.0192346 iteration 61 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.517 ELB improved by 0.0188857 iteration 62 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.499 ELB improved by 0.0185605 iteration 63 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.481 ELB improved by 0.0182553 iteration 64 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.463 ELB improved by 0.017967 iteration 65 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.445 ELB improved by 0.0176927 iteration 66 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.428 ELB improved by 0.01743 iteration 67 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.41 ELB improved by 0.0171765 iteration 68 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.393 ELB improved by 0.0169303 iteration 69 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.377 ELB improved by 0.0166897 iteration 70 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.36 ELB improved by 0.0164533 iteration 71 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.344 ELB improved by 0.01622 iteration 72 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.328 ELB improved by 0.0159887 iteration 73 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.312 ELB improved by 0.0157588 iteration 74 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.297 ELB improved by 0.01553 iteration 75 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.282 ELB improved by 0.0153017 iteration 76 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.266 ELB improved by 0.0150742 iteration 77 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.252 ELB improved by 0.0148473 iteration 78 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.237 ELB improved by 0.0146214 iteration 79 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.223 ELB improved by 0.0143969 iteration 80 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.208 ELB improved by 0.0141742 iteration 81 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.194 ELB improved by 0.013954 iteration 82 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.181 ELB improved by 0.013737 iteration 83 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.167 ELB improved by 0.0135237 iteration 84 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.154 ELB improved by 0.013315 iteration 85 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.141 ELB improved by 0.0131116 iteration 86 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.128 ELB improved by 0.0129142 iteration 87 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.115 ELB improved by 0.0127235 iteration 88 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.103 ELB improved by 0.0125403 iteration 89 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.09 ELB improved by 0.0123651 iteration 90 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.078 ELB improved by 0.0121984 iteration 91 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.066 ELB improved by 0.0120408 iteration 92 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.054 ELB improved by 0.0118928 iteration 93 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.042 ELB improved by 0.0117546 iteration 94 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.031 ELB improved by 0.0116266 iteration 95 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.019 ELB improved by 0.011509 iteration 96 Updating parameters of variational distributions... Calculating ELB.. ELB=-416.008 ELB improved by 0.0114021 iteration 97 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.996 ELB improved by 0.0113058 iteration 98 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.985 ELB improved by 0.0112203 iteration 99 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.974 ELB improved by 0.0111456 iteration 100 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.963 ELB improved by 0.0110816 iteration 101 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.952 ELB improved by 0.0110283 iteration 102 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.941 ELB improved by 0.0109856 iteration 103 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.93 ELB improved by 0.0109533 iteration 104 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.919 ELB improved by 0.0109314 iteration 105 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.908 ELB improved by 0.0109196 iteration 106 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.897 ELB improved by 0.0109178 iteration 107 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.886 ELB improved by 0.0109258 iteration 108 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.875 ELB improved by 0.0109433 iteration 109 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.864 ELB improved by 0.0109702 iteration 110 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.853 ELB improved by 0.0110061 iteration 111 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.842 ELB improved by 0.011051 iteration 112 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.831 ELB improved by 0.0111044 iteration 113 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.82 ELB improved by 0.0111661 iteration 114 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.809 ELB improved by 0.0112359 iteration 115 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.798 ELB improved by 0.0113133 iteration 116 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.786 ELB improved by 0.0113981 iteration 117 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.775 ELB improved by 0.0114899 iteration 118 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.763 ELB improved by 0.0115881 iteration 119 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.751 ELB improved by 0.0116924 iteration 120 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.74 ELB improved by 0.0118021 iteration 121 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.728 ELB improved by 0.0119168 iteration 122 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.716 ELB improved by 0.0120356 iteration 123 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.704 ELB improved by 0.012158 iteration 124 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.691 ELB improved by 0.0122829 iteration 125 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.679 ELB improved by 0.0124095 iteration 126 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.666 ELB improved by 0.0125368 iteration 127 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.654 ELB improved by 0.0126635 iteration 128 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.641 ELB improved by 0.0127885 iteration 129 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.628 ELB improved by 0.0129103 iteration 130 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.615 ELB improved by 0.0130276 iteration 131 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.602 ELB improved by 0.0131386 iteration 132 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.589 ELB improved by 0.0132417 iteration 133 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.575 ELB improved by 0.0133353 iteration 134 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.562 ELB improved by 0.0134174 iteration 135 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.548 ELB improved by 0.0134862 iteration 136 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.535 ELB improved by 0.0135399 iteration 137 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.521 ELB improved by 0.0135768 iteration 138 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.508 ELB improved by 0.0135951 iteration 139 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.494 ELB improved by 0.0135934 iteration 140 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.48 ELB improved by 0.0135703 iteration 141 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.467 ELB improved by 0.0135247 iteration 142 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.453 ELB improved by 0.0134561 iteration 143 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.44 ELB improved by 0.013364 iteration 144 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.427 ELB improved by 0.0132487 iteration 145 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.414 ELB improved by 0.013111 iteration 146 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.401 ELB improved by 0.0129519 iteration 147 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.388 ELB improved by 0.0127736 iteration 148 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.375 ELB improved by 0.0125786 iteration 149 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.363 ELB improved by 0.0123702 iteration 150 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.351 ELB improved by 0.0121526 iteration 151 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.339 ELB improved by 0.011931 iteration 152 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.327 ELB improved by 0.0117114 iteration 153 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.316 ELB improved by 0.0115013 iteration 154 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.304 ELB improved by 0.0113097 iteration 155 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.293 ELB improved by 0.0111478 iteration 156 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.282 ELB improved by 0.0110299 iteration 157 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.271 ELB improved by 0.0109745 iteration 158 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.26 ELB improved by 0.0110069 iteration 159 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.249 ELB improved by 0.0111623 iteration 160 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.238 ELB improved by 0.011492 iteration 161 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.226 ELB improved by 0.0120731 iteration 162 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.212 ELB improved by 0.0130259 iteration 163 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.198 ELB improved by 0.0145444 iteration 164 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.181 ELB improved by 0.0169524 iteration 165 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.16 ELB improved by 0.0208066 iteration 166 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.133 ELB improved by 0.0270887 iteration 167 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.096 ELB improved by 0.0375445 iteration 168 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.04 ELB improved by 0.0551826 iteration 169 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.956 ELB improved by 0.0844826 iteration 170 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.827 ELB improved by 0.129046 iteration 171 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.644 ELB improved by 0.182497 iteration 172 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.423 ELB improved by 0.221228 iteration 173 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.195 ELB improved by 0.228132 iteration 174 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.978 ELB improved by 0.217135 iteration 175 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.768 ELB improved by 0.209487 iteration 176 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.554 ELB improved by 0.214072 iteration 177 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.326 ELB improved by 0.228011 iteration 178 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.09 ELB improved by 0.235845 iteration 179 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.871 ELB improved by 0.219422 iteration 180 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.687 ELB improved by 0.184199 iteration 181 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.532 ELB improved by 0.154386 iteration 182 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.386 ELB improved by 0.146028 iteration 183 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.222 ELB improved by 0.16467 iteration 184 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.017 ELB improved by 0.204591 iteration 185 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.784 ELB improved by 0.232711 iteration 186 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.573 ELB improved by 0.211061 iteration 187 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.419 ELB improved by 0.154458 iteration 188 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.318 ELB improved by 0.101206 iteration 189 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.252 ELB improved by 0.0655142 iteration 190 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.208 ELB improved by 0.0442575 iteration 191 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.176 ELB improved by 0.0317762 iteration 192 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.152 ELB improved by 0.0243174 iteration 193 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.132 ELB improved by 0.0198811 iteration 194 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.114 ELB improved by 0.0174794 iteration 195 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.098 ELB improved by 0.0166758 iteration 196 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.08 ELB improved by 0.017365 iteration 197 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.061 ELB improved by 0.0196675 iteration 198 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.037 ELB improved by 0.0238273 iteration 199 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.007 ELB improved by 0.0299831 iteration 200 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.969 ELB improved by 0.0376821 iteration 201 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.924 ELB improved by 0.0452422 iteration 202 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.874 ELB improved by 0.0497424 iteration 203 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.826 ELB improved by 0.0485945 iteration 204 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.784 ELB improved by 0.0417461 iteration 205 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.752 ELB improved by 0.0318429 iteration 206 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.73 ELB improved by 0.0220997 iteration 207 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.716 ELB improved by 0.0144231 iteration 208 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.706 ELB improved by 0.00918088 ELB converged iteration 1 Updating parameters of variational distributions... Calculating ELB.. ELB=-859.667 ELB improved by inf iteration 2 Updating parameters of variational distributions... Calculating ELB.. ELB=-574.677 ELB improved by 284.99 iteration 3 Updating parameters of variational distributions... Calculating ELB.. ELB=-514.153 ELB improved by 60.524 iteration 4 Updating parameters of variational distributions... Calculating ELB.. ELB=-470.064 ELB improved by 44.0888 iteration 5 Updating parameters of variational distributions... Calculating ELB.. ELB=-450.344 ELB improved by 19.7196 iteration 6 Updating parameters of variational distributions... Calculating ELB.. ELB=-443.123 ELB improved by 7.2213 iteration 7 Updating parameters of variational distributions... Calculating ELB.. ELB=-439.134 ELB improved by 3.98936 iteration 8 Updating parameters of variational distributions... Calculating ELB.. ELB=-436.1 ELB improved by 3.03414 iteration 9 Updating parameters of variational distributions... Calculating ELB.. ELB=-433.441 ELB improved by 2.65902 iteration 10 Updating parameters of variational distributions... Calculating ELB.. ELB=-430.965 ELB improved by 2.47537 iteration 11 Updating parameters of variational distributions... Calculating ELB.. ELB=-428.618 ELB improved by 2.34764 iteration 12 Updating parameters of variational distributions... Calculating ELB.. ELB=-426.386 ELB improved by 2.23162 iteration 13 Updating parameters of variational distributions... Calculating ELB.. ELB=-424.273 ELB improved by 2.11334 iteration 14 Updating parameters of variational distributions... Calculating ELB.. ELB=-422.286 ELB improved by 1.98607 iteration 15 Updating parameters of variational distributions... Calculating ELB.. ELB=-420.442 ELB improved by 1.84407 iteration 16 Updating parameters of variational distributions... Calculating ELB.. ELB=-418.76 ELB improved by 1.68263 iteration 17 Updating parameters of variational distributions... Calculating ELB.. ELB=-417.26 ELB improved by 1.49945 iteration 18 Updating parameters of variational distributions... Calculating ELB.. ELB=-415.963 ELB improved by 1.29682 iteration 19 Updating parameters of variational distributions... Calculating ELB.. ELB=-414.879 ELB improved by 1.0844 iteration 20 Updating parameters of variational distributions... Calculating ELB.. ELB=-414 ELB improved by 0.878646 iteration 21 Updating parameters of variational distributions... Calculating ELB.. ELB=-413.304 ELB improved by 0.696762 iteration 22 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.754 ELB improved by 0.549714 iteration 23 Updating parameters of variational distributions... Calculating ELB.. ELB=-412.314 ELB improved by 0.439564 iteration 24 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.953 ELB improved by 0.361701 iteration 25 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.644 ELB improved by 0.308817 iteration 26 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.37 ELB improved by 0.273879 iteration 27 Updating parameters of variational distributions... Calculating ELB.. ELB=-411.119 ELB improved by 0.251389 iteration 28 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.881 ELB improved by 0.237491 iteration 29 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.652 ELB improved by 0.229571 iteration 30 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.426 ELB improved by 0.225784 iteration 31 Updating parameters of variational distributions... Calculating ELB.. ELB=-410.201 ELB improved by 0.22468 iteration 32 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.976 ELB improved by 0.225017 iteration 33 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.75 ELB improved by 0.225754 iteration 34 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.524 ELB improved by 0.226164 iteration 35 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.298 ELB improved by 0.225935 iteration 36 Updating parameters of variational distributions... Calculating ELB.. ELB=-409.073 ELB improved by 0.225189 iteration 37 Updating parameters of variational distributions... Calculating ELB.. ELB=-408.849 ELB improved by 0.224437 iteration 38 Updating parameters of variational distributions... Calculating ELB.. ELB=-408.624 ELB improved by 0.224573 iteration 39 Updating parameters of variational distributions... Calculating ELB.. ELB=-408.397 ELB improved by 0.226952 iteration 40 Updating parameters of variational distributions... Calculating ELB.. ELB=-408.164 ELB improved by 0.233515 iteration 41 Updating parameters of variational distributions... Calculating ELB.. ELB=-407.917 ELB improved by 0.246789 iteration 42 Updating parameters of variational distributions... Calculating ELB.. ELB=-407.647 ELB improved by 0.269269 iteration 43 Updating parameters of variational distributions... Calculating ELB.. ELB=-407.346 ELB improved by 0.301399 iteration 44 Updating parameters of variational distributions... Calculating ELB.. ELB=-407.007 ELB improved by 0.33904 iteration 45 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.631 ELB improved by 0.375738 iteration 46 Updating parameters of variational distributions... Calculating ELB.. ELB=-406.22 ELB improved by 0.411246 iteration 47 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.767 ELB improved by 0.452928 iteration 48 Updating parameters of variational distributions... Calculating ELB.. ELB=-405.26 ELB improved by 0.506651 iteration 49 Updating parameters of variational distributions... Calculating ELB.. ELB=-404.688 ELB improved by 0.572244 iteration 50 Updating parameters of variational distributions... Calculating ELB.. ELB=-404.041 ELB improved by 0.647428 iteration 51 Updating parameters of variational distributions... Calculating ELB.. ELB=-403.309 ELB improved by 0.731776 iteration 52 Updating parameters of variational distributions... Calculating ELB.. ELB=-402.483 ELB improved by 0.825601 iteration 53 Updating parameters of variational distributions... Calculating ELB.. ELB=-401.556 ELB improved by 0.927285 iteration 54 Updating parameters of variational distributions... Calculating ELB.. ELB=-400.524 ELB improved by 1.03202 iteration 55 Updating parameters of variational distributions... Calculating ELB.. ELB=-399.393 ELB improved by 1.13143 iteration 56 Updating parameters of variational distributions... Calculating ELB.. ELB=-398.178 ELB improved by 1.21503 iteration 57 Updating parameters of variational distributions... Calculating ELB.. ELB=-396.904 ELB improved by 1.27379 iteration 58 Updating parameters of variational distributions... Calculating ELB.. ELB=-395.596 ELB improved by 1.30766 iteration 59 Updating parameters of variational distributions... Calculating ELB.. ELB=-394.254 ELB improved by 1.34217 iteration 60 Updating parameters of variational distributions... Calculating ELB.. ELB=-392.92 ELB improved by 1.33394 iteration 61 Updating parameters of variational distributions... Calculating ELB.. ELB=-391.8 ELB improved by 1.12037 iteration 62 Updating parameters of variational distributions... Calculating ELB.. ELB=-390.991 ELB improved by 0.808375 iteration 63 Updating parameters of variational distributions... Calculating ELB.. ELB=-390.433 ELB improved by 0.558032 iteration 64 Updating parameters of variational distributions... Calculating ELB.. ELB=-390.065 ELB improved by 0.368714 iteration 65 Updating parameters of variational distributions... Calculating ELB.. ELB=-389.833 ELB improved by 0.231393 iteration 66 Updating parameters of variational distributions... Calculating ELB.. ELB=-389.689 ELB improved by 0.144186 iteration 67 Updating parameters of variational distributions... Calculating ELB.. ELB=-389.596 ELB improved by 0.0932398 iteration 68 Updating parameters of variational distributions... Calculating ELB.. ELB=-389.532 ELB improved by 0.063726 iteration 69 Updating parameters of variational distributions... Calculating ELB.. ELB=-389.486 ELB improved by 0.0460017 iteration 70 Updating parameters of variational distributions... Calculating ELB.. ELB=-389.451 ELB improved by 0.034778 iteration 71 Updating parameters of variational distributions... Calculating ELB.. ELB=-389.424 ELB improved by 0.0272885 iteration 72 Updating parameters of variational distributions... Calculating ELB.. ELB=-389.402 ELB improved by 0.0220649 iteration 73 Updating parameters of variational distributions... Calculating ELB.. ELB=-389.384 ELB improved by 0.0182904 iteration 74 Updating parameters of variational distributions... Calculating ELB.. ELB=-389.368 ELB improved by 0.0154839 iteration 75 Updating parameters of variational distributions... Calculating ELB.. ELB=-389.355 ELB improved by 0.0133465 iteration 76 Updating parameters of variational distributions... Calculating ELB.. ELB=-389.343 ELB improved by 0.0116843 iteration 77 Updating parameters of variational distributions... Calculating ELB.. ELB=-389.333 ELB improved by 0.0103673 iteration 78 Updating parameters of variational distributions... Calculating ELB.. ELB=-389.323 ELB improved by 0.00930582 ELB converged [ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ] > > proc.time() user system elapsed 2.251 0.223 2.475
graper.Rcheck/graper-Ex.timings
name | user | system | elapsed | |
coef.graper | 0.043 | 0.012 | 0.055 | |
getPIPs | 0.04 | 0.01 | 0.05 | |
graper | 0.066 | 0.014 | 0.079 | |
makeExampleData | 0.008 | 0.001 | 0.009 | |
makeExampleDataWithUnequalGroups | 0.009 | 0.002 | 0.010 | |
plotELBO | 0.213 | 0.023 | 0.238 | |
plotGroupPenalties | 0.740 | 0.035 | 0.778 | |
plotPosterior | 0.431 | 0.019 | 0.452 | |
predict.graper | 1.631 | 0.076 | 1.749 | |
print.graper | 0.045 | 0.015 | 0.060 | |