Raphael Gottardo
| Snapshot Date: 2023-04-10 14:00:05 -0400 (Mon, 10 Apr 2023) |
| git_url: https://git.bioconductor.org/packages/bridge |
| git_branch: RELEASE_3_16 |
| git_last_commit: 1e5a52f |
| git_last_commit_date: 2022-11-01 10:39:18 -0400 (Tue, 01 Nov 2022) |
| Back to Multiple platform build/check report for BioC 3.16: simplified long |
|
This page was generated on 2023-04-12 11:06:01 -0400 (Wed, 12 Apr 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | 4.2.3 (2023-03-15) -- "Shortstop Beagle" | 4502 |
| palomino4 | Windows Server 2022 Datacenter | x64 | 4.2.3 (2023-03-15 ucrt) -- "Shortstop Beagle" | 4282 |
| lconway | macOS 12.5.1 Monterey | x86_64 | 4.2.3 (2023-03-15) -- "Shortstop Beagle" | 4310 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the bridge package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/bridge.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 226/2183 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Raphael Gottardo
| nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | | ||||||||
| lconway | macOS 12.5.1 Monterey / x86_64 | ERROR | ERROR | skipped | skipped | |||||||||
| Package: bridge |
| Version: 1.62.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL bridge |
| StartedAt: 2023-04-10 15:04:17 -0400 (Mon, 10 Apr 2023) |
| EndedAt: 2023-04-10 15:04:23 -0400 (Mon, 10 Apr 2023) |
| EllapsedTime: 6.0 seconds |
| RetCode: 1 |
| Status: ERROR |
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### Running command:
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### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL bridge
###
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.2/Resources/library’
* installing *source* package ‘bridge’ ...
** using staged installation
** libs
clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c bridge2.affy.c -o bridge2.affy.o
bridge2.affy.c:36:7: warning: unused variable 'old_model' [-Wunused-variable]
int old_model;
^
bridge2.affy.c:37:7: warning: unused variable 'count_model' [-Wunused-variable]
int count_model=0;
^
bridge2.affy.c:302:3: error: implicit declaration of function 'dirichlet' is invalid in C99 [-Werror,-Wimplicit-function-declaration]
dirichlet(gamma, 2, w);
^
bridge2.affy.c:302:3: note: did you mean 'dirichlet2'?
bridge2.affy.c:10:6: note: 'dirichlet2' declared here
void dirichlet2(double *gamma, int n, double *w);
^
bridge2.affy.c:282:10: warning: unused variable 'w_new' [-Wunused-variable]
double w_new[2];
^
3 warnings and 1 error generated.
make: *** [bridge2.affy.o] Error 1
ERROR: compilation failed for package ‘bridge’
* removing ‘/Library/Frameworks/R.framework/Versions/4.2/Resources/library/bridge’