Back to Multiple platform build/check report for BioC 3.16: simplified long |
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This page was generated on 2023-04-12 11:06:30 -0400 (Wed, 12 Apr 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | 4.2.3 (2023-03-15) -- "Shortstop Beagle" | 4502 |
palomino4 | Windows Server 2022 Datacenter | x64 | 4.2.3 (2023-03-15 ucrt) -- "Shortstop Beagle" | 4282 |
lconway | macOS 12.5.1 Monterey | x86_64 | 4.2.3 (2023-03-15) -- "Shortstop Beagle" | 4310 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the Travel package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Travel.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 2085/2183 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Travel 1.6.0 (landing page) Jiefei Wang
| nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | OK | OK | OK | |||||||||
palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
lconway | macOS 12.5.1 Monterey / x86_64 | ERROR | ERROR | skipped | skipped | |||||||||
Package: Travel |
Version: 1.6.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data Travel |
StartedAt: 2023-04-10 18:18:32 -0400 (Mon, 10 Apr 2023) |
EndedAt: 2023-04-10 18:19:17 -0400 (Mon, 10 Apr 2023) |
EllapsedTime: 44.9 seconds |
RetCode: 1 |
Status: ERROR |
PackageFile: None |
PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data Travel ### ############################################################################## ############################################################################## * checking for file ‘Travel/DESCRIPTION’ ... OK * preparing ‘Travel’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes ----------------------------------- * installing *source* package ‘Travel’ ... ** using staged installation ** libs clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include -fPIC -Wall -g -O2 -c Cpp_interface.cpp -o Cpp_interface.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include -fPIC -Wall -g -O2 -c altfile_operations.cpp -o altfile_operations.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include -fPIC -Wall -g -O2 -c altmmap_operations.cpp -o altmmap_operations.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include -fPIC -Wall -g -O2 -c altrep_manager.cpp -o altrep_manager.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include -fPIC -Wall -g -O2 -c class_Cache_block.cpp -o class_Cache_block.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include -fPIC -Wall -g -O2 -c class_Filesystem_cache_copier.cpp -o class_Filesystem_cache_copier.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include -fPIC -Wall -g -O2 -c class_Filesystem_file_data.cpp -o class_Filesystem_file_data.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include -fPIC -Wall -g -O2 -c class_Memory_mapped.cpp -o class_Memory_mapped.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found In file included from class_Memory_mapped.cpp:19: ./class_Memory_mapped.h:19:16: warning: private field 'hint' is not used [-Wunused-private-field] Cache_hint hint = Normal; ^ ./class_Memory_mapped.h:21:11: warning: private field 'file_handle' is not used [-Wunused-private-field] void *file_handle = nullptr; ^ ./class_Memory_mapped.h:22:11: warning: private field 'map_handle' is not used [-Wunused-private-field] void *map_handle = nullptr; ^ 3 warnings generated. clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include -fPIC -Wall -g -O2 -c class_Protect_guard.cpp -o class_Protect_guard.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include -fPIC -Wall -g -O2 -c class_Subset_index.cpp -o class_Subset_index.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include -fPIC -Wall -g -O2 -c class_Timer.cpp -o class_Timer.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include -fPIC -Wall -g -O2 -c class_Unique_buffer.cpp -o class_Unique_buffer.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include -fPIC -Wall -g -O2 -c examples.cpp -o examples.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include -fPIC -Wall -g -O2 -c filesystem_manager.cpp -o filesystem_manager.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include -fPIC -Wall -g -O2 -c filesystem_operations_dokan.cpp -o filesystem_operations_dokan.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include -fPIC -Wall -g -O2 -c filesystem_operations_fuse.cpp -o filesystem_operations_fuse.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found filesystem_operations_fuse.cpp:4:10: fatal error: 'fuse_lowlevel.h' file not found #include <fuse_lowlevel.h> ^~~~~~~~~~~~~~~~~ 1 error generated. make: *** [filesystem_operations_fuse.o] Error 1 ERROR: compilation failed for package ‘Travel’ * removing ‘/private/tmp/RtmpbXjlJm/Rinstcbf638c9a712/Travel’ ----------------------------------- ERROR: package installation failed