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This page was generated on 2023-04-12 11:05:56 -0400 (Wed, 12 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.5 LTS)x86_644.2.3 (2023-03-15) -- "Shortstop Beagle" 4502
palomino4Windows Server 2022 Datacenterx644.2.3 (2023-03-15 ucrt) -- "Shortstop Beagle" 4282
lconwaymacOS 12.5.1 Montereyx86_644.2.3 (2023-03-15) -- "Shortstop Beagle" 4310
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for TraRe on palomino4


To the developers/maintainers of the TraRe package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/TraRe.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2083/2183HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TraRe 1.6.5  (landing page)
Jesus de la Fuente Cedeño
Snapshot Date: 2023-04-10 14:00:05 -0400 (Mon, 10 Apr 2023)
git_url: https://git.bioconductor.org/packages/TraRe
git_branch: RELEASE_3_16
git_last_commit: ce4aed4
git_last_commit_date: 2022-12-14 00:32:12 -0400 (Wed, 14 Dec 2022)
nebbiolo2Linux (Ubuntu 20.04.5 LTS) / x86_64  ERROR    ERROR  skipped
palomino4Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
lconwaymacOS 12.5.1 Monterey / x86_64  OK    ERROR  skippedskipped

Summary

Package: TraRe
Version: 1.6.5
Command: chmod a+r TraRe -R && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data TraRe
StartedAt: 2023-04-10 22:09:27 -0400 (Mon, 10 Apr 2023)
EndedAt: 2023-04-10 22:09:44 -0400 (Mon, 10 Apr 2023)
EllapsedTime: 17.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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###
### Running command:
###
###   chmod a+r TraRe -R && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data TraRe
###
##############################################################################
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* checking for file 'TraRe/DESCRIPTION' ... OK
* preparing 'TraRe':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'TraRe.Rmd' using rmarkdown
Quitting from lines 137-187 (TraRe.Rmd) 
Error: processing vignette 'TraRe.Rmd' failed with diagnostics:
unused argument (lognorm_est_counts = SeObject)
--- failed re-building 'TraRe.Rmd'

SUMMARY: processing the following file failed:
  'TraRe.Rmd'

Error: Vignette re-building failed.
Execution halted