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This page was generated on 2023-04-12 11:05:55 -0400 (Wed, 12 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.5 LTS)x86_644.2.3 (2023-03-15) -- "Shortstop Beagle" 4502
palomino4Windows Server 2022 Datacenterx644.2.3 (2023-03-15 ucrt) -- "Shortstop Beagle" 4282
lconwaymacOS 12.5.1 Montereyx86_644.2.3 (2023-03-15) -- "Shortstop Beagle" 4310
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for TimeSeriesExperiment on palomino4


To the developers/maintainers of the TimeSeriesExperiment package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/TimeSeriesExperiment.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2052/2183HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TimeSeriesExperiment 1.16.0  (landing page)
Lan Huong Nguyen
Snapshot Date: 2023-04-10 14:00:05 -0400 (Mon, 10 Apr 2023)
git_url: https://git.bioconductor.org/packages/TimeSeriesExperiment
git_branch: RELEASE_3_16
git_last_commit: 341d228
git_last_commit_date: 2022-11-01 11:18:50 -0400 (Tue, 01 Nov 2022)
nebbiolo2Linux (Ubuntu 20.04.5 LTS) / x86_64  OK    ERROR  skipped
palomino4Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
lconwaymacOS 12.5.1 Monterey / x86_64  OK    ERROR  skippedskipped

Summary

Package: TimeSeriesExperiment
Version: 1.16.0
Command: chmod a+r TimeSeriesExperiment -R && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data TimeSeriesExperiment
StartedAt: 2023-04-10 22:05:45 -0400 (Mon, 10 Apr 2023)
EndedAt: 2023-04-10 22:06:44 -0400 (Mon, 10 Apr 2023)
EllapsedTime: 58.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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###
### Running command:
###
###   chmod a+r TimeSeriesExperiment -R && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data TimeSeriesExperiment
###
##############################################################################
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* checking for file 'TimeSeriesExperiment/DESCRIPTION' ... OK
* preparing 'TimeSeriesExperiment':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'cop1_knockout_timecourse.Rmd' using rmarkdown
Quitting from lines 229-239 (cop1_knockout_timecourse.Rmd) 
Error: processing vignette 'cop1_knockout_timecourse.Rmd' failed with diagnostics:
dim(X) must have a positive length
--- failed re-building 'cop1_knockout_timecourse.Rmd'

SUMMARY: processing the following file failed:
  'cop1_knockout_timecourse.Rmd'

Error: Vignette re-building failed.
Execution halted