| Back to Multiple platform build/check report for BioC 3.16: simplified long |
|
This page was generated on 2023-04-12 11:05:48 -0400 (Wed, 12 Apr 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | 4.2.3 (2023-03-15) -- "Shortstop Beagle" | 4502 |
| palomino4 | Windows Server 2022 Datacenter | x64 | 4.2.3 (2023-03-15 ucrt) -- "Shortstop Beagle" | 4282 |
| lconway | macOS 12.5.1 Monterey | x86_64 | 4.2.3 (2023-03-15) -- "Shortstop Beagle" | 4310 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the ReportingTools package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ReportingTools.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1650/2183 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| ReportingTools 2.38.0 (landing page) Jason A. Hackney
| nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| palomino4 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
| lconway | macOS 12.5.1 Monterey / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| Package: ReportingTools |
| Version: 2.38.0 |
| Command: chmod a+r ReportingTools -R && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data ReportingTools |
| StartedAt: 2023-04-10 21:02:20 -0400 (Mon, 10 Apr 2023) |
| EndedAt: 2023-04-10 21:04:09 -0400 (Mon, 10 Apr 2023) |
| EllapsedTime: 108.5 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r ReportingTools -R && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data ReportingTools ### ############################################################################## ############################################################################## * checking for file 'ReportingTools/DESCRIPTION' ... OK * preparing 'ReportingTools': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'basicReportingTools.Rnw' using Sweave texify: major issue: So far, you have not checked for updates as a MiKTeX user. --- finished re-building 'basicReportingTools.Rnw' --- re-building 'microarrayAnalysis.Rnw' using Sweave texify: major issue: So far, you have not checked for updates as a MiKTeX user. --- finished re-building 'microarrayAnalysis.Rnw' --- re-building 'rnaseqAnalysis.Rnw' using Sweave texify: major issue: So far, you have not checked for updates as a MiKTeX user. --- finished re-building 'rnaseqAnalysis.Rnw' --- re-building 'shiny.Rnw' using Sweave texify: major issue: So far, you have not checked for updates as a MiKTeX user. --- finished re-building 'shiny.Rnw' --- re-building 'knitr.Rmd' using knitr Warning in file(con, "r") : cannot open file 'jslib/jquery-1.8.0.min.js': No such file or directory Error: processing vignette 'knitr.Rmd' failed with diagnostics: cannot open the connection --- failed re-building 'knitr.Rmd' SUMMARY: processing the following file failed: 'knitr.Rmd' Error: Vignette re-building failed. Execution halted