Back to Multiple platform build/check report for BioC 3.16: simplified long |
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This page was generated on 2023-04-12 11:05:13 -0400 (Wed, 12 Apr 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
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nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | 4.2.3 (2023-03-15) -- "Shortstop Beagle" | 4502 |
palomino4 | Windows Server 2022 Datacenter | x64 | 4.2.3 (2023-03-15 ucrt) -- "Shortstop Beagle" | 4282 |
lconway | macOS 12.5.1 Monterey | x86_64 | 4.2.3 (2023-03-15) -- "Shortstop Beagle" | 4310 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the OpenStats package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/OpenStats.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1405/2183 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
OpenStats 1.10.0 (landing page) Hamed Haseli Mashhadi
| nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | OK | OK | OK | |||||||||
palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
lconway | macOS 12.5.1 Monterey / x86_64 | OK | OK | OK | OK | |||||||||
Package: OpenStats |
Version: 1.10.0 |
Command: /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD check --install=check:OpenStats.install-out.txt --library=/home/biocbuild/bbs-3.16-bioc/R/site-library --timings OpenStats_1.10.0.tar.gz |
StartedAt: 2023-04-10 22:30:02 -0400 (Mon, 10 Apr 2023) |
EndedAt: 2023-04-10 22:31:49 -0400 (Mon, 10 Apr 2023) |
EllapsedTime: 107.0 seconds |
RetCode: 0 |
Status: OK |
CheckDir: OpenStats.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD check --install=check:OpenStats.install-out.txt --library=/home/biocbuild/bbs-3.16-bioc/R/site-library --timings OpenStats_1.10.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.16-bioc/meat/OpenStats.Rcheck’ * using R version 4.2.3 (2023-03-15) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * checking for file ‘OpenStats/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘OpenStats’ version ‘1.10.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘OpenStats’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... ‘OpenStats.Rmd’ using ‘UTF-8’... OK NONE * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK
OpenStats.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD INSTALL OpenStats ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.16-bioc/R/site-library’ * installing *source* package ‘OpenStats’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (OpenStats)
OpenStats.Rcheck/OpenStats-Ex.timings
name | user | system | elapsed | |
OpenStatsAnalysis | 1.718 | 0.016 | 1.738 | |
OpenStatsBuilder | 0 | 0 | 0 | |
OpenStatsComplementarySplit | 1.303 | 0.000 | 1.303 | |
OpenStatsList | 0.906 | 0.085 | 1.117 | |
OpenStatsReport | 1.918 | 0.199 | 2.072 | |
plot.OpenStats | 0.500 | 0.032 | 0.539 | |
plot.OpenStatsComplementarySplit | 1.512 | 0.096 | 1.567 | |
plot.OpenStatsFE | 0.073 | 0.000 | 0.072 | |
plot.OpenStatsMM | 0.522 | 0.089 | 0.598 | |
plot.OpenStatsRR | 0.256 | 0.017 | 0.267 | |
print.OpenStats | 0.451 | 0.077 | 0.535 | |
print.OpenStatsComplementarySplit | 1.452 | 0.187 | 1.604 | |
print.OpenStatsFE | 0.063 | 0.004 | 0.066 | |
print.OpenStatsMM | 0.524 | 0.054 | 0.567 | |
print.OpenStatsRR | 0.255 | 0.029 | 0.278 | |
summary.OpenStats | 0.491 | 0.033 | 0.530 | |
summary.OpenStatsComplementarySplit | 1.717 | 0.156 | 1.835 | |
summary.OpenStatsFE | 0.084 | 0.008 | 0.091 | |
summary.OpenStatsMM | 0.496 | 0.062 | 0.543 | |
summary.OpenStatsRR | 0.240 | 0.053 | 0.286 | |