| Back to Multiple platform build/check report for BioC 3.16: simplified long |
|
This page was generated on 2023-04-12 11:06:18 -0400 (Wed, 12 Apr 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | 4.2.3 (2023-03-15) -- "Shortstop Beagle" | 4502 |
| palomino4 | Windows Server 2022 Datacenter | x64 | 4.2.3 (2023-03-15 ucrt) -- "Shortstop Beagle" | 4282 |
| lconway | macOS 12.5.1 Monterey | x86_64 | 4.2.3 (2023-03-15) -- "Shortstop Beagle" | 4310 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the OmnipathR package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/OmnipathR.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1393/2183 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| OmnipathR 3.6.6 (landing page) Denes Turei
| nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | OK | OK | TIMEOUT | |||||||||
| palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | TIMEOUT | OK | |||||||||
| lconway | macOS 12.5.1 Monterey / x86_64 | OK | OK | TIMEOUT | OK | |||||||||
| Package: OmnipathR |
| Version: 3.6.6 |
| Command: rm -rf OmnipathR.buildbin-libdir && mkdir OmnipathR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh OmnipathR_3.6.6.tar.gz /Library/Frameworks/R.framework/Resources/bin/R OmnipathR.buildbin-libdir |
| StartedAt: 2023-04-10 23:55:28 -0400 (Mon, 10 Apr 2023) |
| EndedAt: 2023-04-10 23:55:47 -0400 (Mon, 10 Apr 2023) |
| EllapsedTime: 18.3 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: OmnipathR_3.6.6.tgz |
| PackageFileSize: 3.03 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf OmnipathR.buildbin-libdir && mkdir OmnipathR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh OmnipathR_3.6.6.tar.gz /Library/Frameworks/R.framework/Resources/bin/R OmnipathR.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=OmnipathR.buildbin-libdir OmnipathR_3.6.6.tar.gz' >>>>>>> * installing *source* package ‘OmnipathR’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location [2023-04-10 23:55:42] [INFO] [OmnipathR] Initialized cache: `/Users/biocbuild/Library/Caches/OmnipathR`. [2023-04-10 23:55:42] [TRACE] [OmnipathR] Running on a build server, wiping cache. [2023-04-10 23:55:42] [TRACE] [OmnipathR] Cache is at `/Users/biocbuild/Library/Caches/OmnipathR`. [2023-04-10 23:55:42] [TRACE] [OmnipathR] Contains 4 files. [2023-04-10 23:55:42] [TRACE] [OmnipathR] Cache is locked: FALSE. [2023-04-10 23:55:42] [SUCCESS] [OmnipathR] Removing all cache contents from `/Users/biocbuild/Library/Caches/OmnipathR`. [2023-04-10 23:55:43] [TRACE] [OmnipathR] Pandoc version: `2.7.3`. [2023-04-10 23:55:43] [TRACE] [OmnipathR] Cache locked: FALSE ** testing if installed package can be loaded from final location [2023-04-10 23:55:45] [INFO] [OmnipathR] Initialized cache: `/Users/biocbuild/Library/Caches/OmnipathR`. [2023-04-10 23:55:45] [TRACE] [OmnipathR] Running on a build server, wiping cache. [2023-04-10 23:55:45] [TRACE] [OmnipathR] Cache is at `/Users/biocbuild/Library/Caches/OmnipathR`. [2023-04-10 23:55:45] [TRACE] [OmnipathR] Contains 1 files. [2023-04-10 23:55:45] [TRACE] [OmnipathR] Cache is locked: FALSE. [2023-04-10 23:55:45] [SUCCESS] [OmnipathR] Removing all cache contents from `/Users/biocbuild/Library/Caches/OmnipathR`. [2023-04-10 23:55:45] [TRACE] [OmnipathR] Pandoc version: `2.7.3`. [2023-04-10 23:55:45] [TRACE] [OmnipathR] Cache locked: FALSE ** testing if installed package keeps a record of temporary installation path * DONE (OmnipathR)