Back to Multiple platform build/check report for BioC 3.16: simplified long |
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This page was generated on 2023-04-12 11:05:06 -0400 (Wed, 12 Apr 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
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nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | 4.2.3 (2023-03-15) -- "Shortstop Beagle" | 4502 |
palomino4 | Windows Server 2022 Datacenter | x64 | 4.2.3 (2023-03-15 ucrt) -- "Shortstop Beagle" | 4282 |
lconway | macOS 12.5.1 Monterey | x86_64 | 4.2.3 (2023-03-15) -- "Shortstop Beagle" | 4310 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the GmicR package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GmicR.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 831/2183 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
GmicR 1.12.0 (landing page) Richard Virgen-Slane
| nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
palomino4 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
lconway | macOS 12.5.1 Monterey / x86_64 | OK | ERROR | skipped | skipped | |||||||||
Package: GmicR |
Version: 1.12.0 |
Command: /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data GmicR |
StartedAt: 2023-04-10 16:53:24 -0400 (Mon, 10 Apr 2023) |
EndedAt: 2023-04-10 16:53:50 -0400 (Mon, 10 Apr 2023) |
EllapsedTime: 25.9 seconds |
RetCode: 1 |
Status: ERROR |
PackageFile: None |
PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data GmicR ### ############################################################################## ############################################################################## * checking for file ‘GmicR/DESCRIPTION’ ... OK * preparing ‘GmicR’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘GmicR_vignette.Rmd’ using rmarkdown Quitting from lines 58-65 (GmicR_vignette.Rmd) Error: processing vignette 'GmicR_vignette.Rmd' failed with diagnostics: cannot open the connection to 'http://xcell.ucsf.edu/iris_u133a_expr.txt' --- failed re-building ‘GmicR_vignette.Rmd’ SUMMARY: processing the following file failed: ‘GmicR_vignette.Rmd’ Error: Vignette re-building failed. Execution halted