| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:07:41 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the graper package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 819/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.11.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | |||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | OK | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
| Package: graper |
| Version: 1.11.0 |
| Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:graper.install-out.txt --library=D:\biocbuild\bbs-3.15-bioc\R\library --no-vignettes --timings graper_1.11.0.tar.gz |
| StartedAt: 2022-03-17 19:15:34 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 19:16:52 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 78.4 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:graper.install-out.txt --library=D:\biocbuild\bbs-3.15-bioc\R\library --no-vignettes --timings graper_1.11.0.tar.gz ### ############################################################################## ############################################################################## * using log directory 'D:/biocbuild/bbs-3.15-bioc/meat/graper.Rcheck' * using R Under development (unstable) (2021-11-21 r81221) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * using option '--no-vignettes' * checking for file 'graper/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'graper' version '1.11.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'graper' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking compiled code ... NOTE Note: information on .o files for x64 is not available File 'D:/biocbuild/bbs-3.15-bioc/R/library/graper/libs/x64/graper.dll': Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran) Found 'exit', possibly from 'exit' (C), 'stop' (Fortran) Found 'printf', possibly from 'printf' (C) Compiled code should not call entry points which might terminate R nor write to stdout/stderr instead of to the console, nor use Fortran I/O nor system RNGs. The detected symbols are linked into the code but might come from libraries and not actually be called. See 'Writing portable packages' in the 'Writing R Extensions' manual. * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 1 NOTE See 'D:/biocbuild/bbs-3.15-bioc/meat/graper.Rcheck/00check.log' for details.
graper.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL graper
###
##############################################################################
##############################################################################
* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'graper' ...
** using staged installation
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -I'D:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include' -I'D:/biocbuild/bbs-3.15-bioc/R/library/RcppArmadillo/include' -I'D:/biocbuild/bbs-3.15-bioc/R/library/BH/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -I'D:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include' -I'D:/biocbuild/bbs-3.15-bioc/R/library/RcppArmadillo/include' -I'D:/biocbuild/bbs-3.15-bioc/R/library/BH/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition -c fit_graper.cpp -o fit_graper.o
In file included from D:/biocbuild/bbs-3.15-bioc/R/library/BH/include/boost/mpl/aux_/na_assert.hpp:23,
from D:/biocbuild/bbs-3.15-bioc/R/library/BH/include/boost/mpl/arg.hpp:25,
from D:/biocbuild/bbs-3.15-bioc/R/library/BH/include/boost/mpl/placeholders.hpp:24,
from D:/biocbuild/bbs-3.15-bioc/R/library/BH/include/boost/iterator/iterator_categories.hpp:16,
from D:/biocbuild/bbs-3.15-bioc/R/library/BH/include/boost/iterator/iterator_facade.hpp:13,
from D:/biocbuild/bbs-3.15-bioc/R/library/BH/include/boost/range/iterator_range_core.hpp:27,
from D:/biocbuild/bbs-3.15-bioc/R/library/BH/include/boost/lexical_cast.hpp:30,
from D:/biocbuild/bbs-3.15-bioc/R/library/BH/include/boost/math/tools/lexical_cast.hpp:12,
from D:/biocbuild/bbs-3.15-bioc/R/library/BH/include/boost/math/tools/convert_from_string.hpp:14,
from D:/biocbuild/bbs-3.15-bioc/R/library/BH/include/boost/math/constants/constants.hpp:14,
from D:/biocbuild/bbs-3.15-bioc/R/library/BH/include/boost/math/special_functions/digamma.hpp:20,
from graper_linear_dense_ff.h:2,
from fit_graper.cpp:4:
D:/biocbuild/bbs-3.15-bioc/R/library/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of 'assert_arg' [-Wparentheses]
failed ************ (Pred::************
^
D:/biocbuild/bbs-3.15-bioc/R/library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of 'assert_not_arg' [-Wparentheses]
failed ************ (boost::mpl::not_<Pred>::************
^
C:/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o graper.dll tmp.def RcppExports.o fit_graper.o -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lRlapack -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR
installing to D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-graper/00new/graper/libs/x64
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'graper'
finding HTML links ... done
coef.graper html
getPIPs html
graper html
makeExampleData html
makeExampleDataWithUnequalGroups html
plotELBO html
plotGroupPenalties html
plotPosterior html
predict.graper html
print.graper html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
DESCRIPTION file of package 'bioDist' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
DESCRIPTION file of package 'rcellminer' is missing or broken
done
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences"
Copyright (C) 2021 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64 (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-832.125
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-575.07
ELB improved by 257.055
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-514.406
ELB improved by 60.6643
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.822
ELB improved by 42.5838
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.408
ELB improved by 20.4139
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.991
ELB improved by 8.41735
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.054
ELB improved by 4.9362
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.668
ELB improved by 4.38605
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.027
ELB improved by 4.64096
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.914
ELB improved by 5.11329
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.537
ELB improved by 5.37685
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.517
ELB improved by 5.02017
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.524
ELB improved by 3.99316
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.827
ELB improved by 2.69646
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.186
ELB improved by 1.6416
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.171
ELB improved by 1.01482
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.484
ELB improved by 0.686774
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.973
ELB improved by 0.510767
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.565
ELB improved by 0.408369
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.221
ELB improved by 0.344034
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.92
ELB improved by 0.301183
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.648
ELB improved by 0.271396
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.398
ELB improved by 0.250007
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.164
ELB improved by 0.234219
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.942
ELB improved by 0.222239
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.729
ELB improved by 0.212842
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.524
ELB improved by 0.205147
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.325
ELB improved by 0.198494
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.133
ELB improved by 0.192384
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.947
ELB improved by 0.186446
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.766
ELB improved by 0.180421
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.592
ELB improved by 0.174156
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.424
ELB improved by 0.167593
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.264
ELB improved by 0.16076
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.11
ELB improved by 0.15375
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.963
ELB improved by 0.146706
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.823
ELB improved by 0.1398
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.69
ELB improved by 0.133217
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.563
ELB improved by 0.127143
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.441
ELB improved by 0.121769
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.324
ELB improved by 0.1173
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.21
ELB improved by 0.113986
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.098
ELB improved by 0.11218
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.985
ELB improved by 0.112431
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.87
ELB improved by 0.115627
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.747
ELB improved by 0.12315
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.61
ELB improved by 0.136751
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.453
ELB improved by 0.157244
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.272
ELB improved by 0.180934
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.074
ELB improved by 0.197306
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.877
ELB improved by 0.197556
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.691
ELB improved by 0.18555
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.521
ELB improved by 0.170654
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.363
ELB improved by 0.157383
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.217
ELB improved by 0.146055
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.081
ELB improved by 0.135976
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.955
ELB improved by 0.126627
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.837
ELB improved by 0.117773
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.727
ELB improved by 0.109361
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.626
ELB improved by 0.10143
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.532
ELB improved by 0.0940674
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.445
ELB improved by 0.0873863
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.363
ELB improved by 0.0815175
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.286
ELB improved by 0.0766169
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.214
ELB improved by 0.072875
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.143
ELB improved by 0.0705201
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.073
ELB improved by 0.0697853
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.003
ELB improved by 0.0707757
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.929
ELB improved by 0.073143
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.854
ELB improved by 0.0756062
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.778
ELB improved by 0.075857
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.706
ELB improved by 0.0717797
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.643
ELB improved by 0.0634374
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.59
ELB improved by 0.0531532
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.546
ELB improved by 0.0433429
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.511
ELB improved by 0.0351007
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.483
ELB improved by 0.0285055
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.459
ELB improved by 0.0232936
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.44
ELB improved by 0.0191793
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.424
ELB improved by 0.0159277
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.411
ELB improved by 0.0133541
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.4
ELB improved by 0.0113132
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.39
ELB improved by 0.00969029
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-900.196
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-585.655
ELB improved by 314.541
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-527.873
ELB improved by 57.7828
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-490.067
ELB improved by 37.8051
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.376
ELB improved by 17.6914
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.748
ELB improved by 7.62799
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.145
ELB improved by 4.60269
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.248
ELB improved by 3.89714
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.372
ELB improved by 3.87628
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.253
ELB improved by 4.11937
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.765
ELB improved by 4.48707
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.85
ELB improved by 4.91547
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.5
ELB improved by 5.34967
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.906
ELB improved by 5.59397
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.768
ELB improved by 5.13885
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.679
ELB improved by 4.08859
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.69
ELB improved by 2.98929
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.596
ELB improved by 2.09358
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.116
ELB improved by 1.48019
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.015
ELB improved by 1.10099
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.139
ELB improved by 0.875953
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.408
ELB improved by 0.73124
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.804
ELB improved by 0.603432
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.331
ELB improved by 0.473588
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.967
ELB improved by 0.364076
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.68
ELB improved by 0.286382
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.446
ELB improved by 0.234371
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.247
ELB improved by 0.199304
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.072
ELB improved by 0.175033
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.914
ELB improved by 0.157829
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.768
ELB improved by 0.145497
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.631
ELB improved by 0.136726
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.501
ELB improved by 0.130708
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.374
ELB improved by 0.126928
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.249
ELB improved by 0.125057
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.124
ELB improved by 0.124886
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.998
ELB improved by 0.1263
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.868
ELB improved by 0.129257
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.735
ELB improved by 0.133785
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.595
ELB improved by 0.13998
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.447
ELB improved by 0.148013
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.288
ELB improved by 0.158114
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.118
ELB improved by 0.170509
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.933
ELB improved by 0.185209
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.731
ELB improved by 0.201574
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.513
ELB improved by 0.217763
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.283
ELB improved by 0.230744
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.045
ELB improved by 0.237614
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.808
ELB improved by 0.2374
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.576
ELB improved by 0.231232
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.355
ELB improved by 0.220883
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.148
ELB improved by 0.207697
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.955
ELB improved by 0.192514
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.779
ELB improved by 0.175954
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.621
ELB improved by 0.158598
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.48
ELB improved by 0.141031
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.356
ELB improved by 0.123811
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.248
ELB improved by 0.107425
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.156
ELB improved by 0.0922499
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.078
ELB improved by 0.0785359
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.011
ELB improved by 0.066407
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.955
ELB improved by 0.0558791
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.909
ELB improved by 0.0468857
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.869
ELB improved by 0.0393046
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.836
ELB improved by 0.0329827
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.808
ELB improved by 0.027755
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.785
ELB improved by 0.0234595
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.765
ELB improved by 0.019945
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.748
ELB improved by 0.0170765
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.733
ELB improved by 0.0147372
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.72
ELB improved by 0.0128279
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.709
ELB improved by 0.0112662
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.699
ELB improved by 0.00998439
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-887.886
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-583.238
ELB improved by 304.648
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-523.315
ELB improved by 59.9229
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-483.892
ELB improved by 39.4224
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.459
ELB improved by 19.433
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.821
ELB improved by 8.63809
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.884
ELB improved by 4.93756
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.148
ELB improved by 3.73544
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.909
ELB improved by 3.23954
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.96
ELB improved by 2.94875
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.278
ELB improved by 2.68172
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.891
ELB improved by 2.38744
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.822
ELB improved by 2.06848
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.086
ELB improved by 1.736
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.685
ELB improved by 1.40116
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.599
ELB improved by 1.08642
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.779
ELB improved by 0.819626
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.163
ELB improved by 0.616371
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.689
ELB improved by 0.473842
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.311
ELB improved by 0.378482
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.995
ELB improved by 0.31553
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.722
ELB improved by 0.273517
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.477
ELB improved by 0.244834
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.252
ELB improved by 0.224913
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.041
ELB improved by 0.211204
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.838
ELB improved by 0.202289
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.641
ELB improved by 0.197251
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.446
ELB improved by 0.195341
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.25
ELB improved by 0.195878
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.052
ELB improved by 0.198237
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.85
ELB improved by 0.201856
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.643
ELB improved by 0.206236
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.433
ELB improved by 0.210944
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.217
ELB improved by 0.215629
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.997
ELB improved by 0.220042
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.773
ELB improved by 0.224061
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.545
ELB improved by 0.227689
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.314
ELB improved by 0.231037
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.08
ELB improved by 0.234281
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.842
ELB improved by 0.237599
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.601
ELB improved by 0.241106
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.356
ELB improved by 0.244801
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.108
ELB improved by 0.248535
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.856
ELB improved by 0.251998
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.601
ELB improved by 0.254749
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.345
ELB improved by 0.25627
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.089
ELB improved by 0.256057
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.835
ELB improved by 0.253732
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.586
ELB improved by 0.249178
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.343
ELB improved by 0.242666
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.108
ELB improved by 0.234936
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.881
ELB improved by 0.227203
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.66
ELB improved by 0.220988
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.442
ELB improved by 0.217634
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.225
ELB improved by 0.217347
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.007
ELB improved by 0.218157
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.791
ELB improved by 0.216258
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.582
ELB improved by 0.208682
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.386
ELB improved by 0.195628
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.207
ELB improved by 0.179739
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.042
ELB improved by 0.164416
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.889
ELB improved by 0.153272
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.739
ELB improved by 0.150093
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.58
ELB improved by 0.158331
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.402
ELB improved by 0.177945
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.206
ELB improved by 0.196666
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.017
ELB improved by 0.189222
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.867
ELB improved by 0.149707
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.763
ELB improved by 0.103864
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.692
ELB improved by 0.0706429
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.642
ELB improved by 0.0505867
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.603
ELB improved by 0.038873
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.571
ELB improved by 0.031849
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.544
ELB improved by 0.0275178
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.519
ELB improved by 0.0248575
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.495
ELB improved by 0.0233289
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.473
ELB improved by 0.0226244
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.45
ELB improved by 0.0225457
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.427
ELB improved by 0.0229416
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.404
ELB improved by 0.0236768
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.379
ELB improved by 0.0246269
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.353
ELB improved by 0.0256961
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.326
ELB improved by 0.0268511
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.298
ELB improved by 0.028153
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.268
ELB improved by 0.0297721
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.236
ELB improved by 0.0319842
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.201
ELB improved by 0.0351658
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.162
ELB improved by 0.039798
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.115
ELB improved by 0.0464613
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.059
ELB improved by 0.0557473
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.991
ELB improved by 0.0679696
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.909
ELB improved by 0.0826655
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.81
ELB improved by 0.0983124
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.698
ELB improved by 0.11283
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.574
ELB improved by 0.123988
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.445
ELB improved by 0.128364
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.323
ELB improved by 0.122505
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.214
ELB improved by 0.109117
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.117
ELB improved by 0.0969308
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.026
ELB improved by 0.09028
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.941
ELB improved by 0.0850508
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.866
ELB improved by 0.0755391
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.804
ELB improved by 0.0615605
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.757
ELB improved by 0.0473619
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.721
ELB improved by 0.0362447
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.692
ELB improved by 0.0287258
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.668
ELB improved by 0.0238619
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.647
ELB improved by 0.0205499
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.629
ELB improved by 0.0180032
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.614
ELB improved by 0.0157885
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.6
ELB improved by 0.0137335
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.588
ELB improved by 0.0118201
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.578
ELB improved by 0.0100929
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.569
ELB improved by 0.00859806
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-877.651
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-606.4
ELB improved by 271.251
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-547.87
ELB improved by 58.5304
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-501.833
ELB improved by 46.0372
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-476.218
ELB improved by 25.6148
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.658
ELB improved by 11.5595
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.136
ELB improved by 6.52273
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.715
ELB improved by 5.42114
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.036
ELB improved by 5.67892
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.665
ELB improved by 6.37065
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.973
ELB improved by 6.69246
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.131
ELB improved by 5.84173
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.093
ELB improved by 4.0379
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.719
ELB improved by 2.37384
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.347
ELB improved by 1.37185
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.487
ELB improved by 0.86059
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.891
ELB improved by 0.595516
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.445
ELB improved by 0.445662
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.093
ELB improved by 0.352823
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.802
ELB improved by 0.29074
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.555
ELB improved by 0.246674
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.341
ELB improved by 0.21392
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.153
ELB improved by 0.188667
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.984
ELB improved by 0.168606
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.832
ELB improved by 0.15226
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.693
ELB improved by 0.138646
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.566
ELB improved by 0.127082
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.449
ELB improved by 0.117086
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.341
ELB improved by 0.108308
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.24
ELB improved by 0.100492
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.147
ELB improved by 0.0934478
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.06
ELB improved by 0.0870353
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.979
ELB improved by 0.0811495
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.903
ELB improved by 0.0757128
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.832
ELB improved by 0.0706677
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.766
ELB improved by 0.065971
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.705
ELB improved by 0.0615906
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.647
ELB improved by 0.0575014
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.593
ELB improved by 0.0536839
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.543
ELB improved by 0.0501217
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.496
ELB improved by 0.0468004
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.453
ELB improved by 0.043707
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.412
ELB improved by 0.0408293
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.374
ELB improved by 0.0381552
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.338
ELB improved by 0.0356729
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.305
ELB improved by 0.0333708
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.273
ELB improved by 0.0312374
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.244
ELB improved by 0.0292616
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.217
ELB improved by 0.0274325
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.191
ELB improved by 0.0257396
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.167
ELB improved by 0.0241729
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.144
ELB improved by 0.022723
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.123
ELB improved by 0.0213809
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.103
ELB improved by 0.0201382
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.084
ELB improved by 0.0189874
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.066
ELB improved by 0.017921
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.049
ELB improved by 0.0169326
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.033
ELB improved by 0.0160159
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.018
ELB improved by 0.0151655
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.003
ELB improved by 0.0143761
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.99
ELB improved by 0.0136431
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.977
ELB improved by 0.0129623
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.964
ELB improved by 0.0123296
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.953
ELB improved by 0.0117416
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.941
ELB improved by 0.0111951
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.931
ELB improved by 0.0106871
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.92
ELB improved by 0.0102151
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.911
ELB improved by 0.00977652
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
1.87 0.29 2.15
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.06 | 0.00 | 0.06 | |
| getPIPs | 0.04 | 0.02 | 0.05 | |
| graper | 0.08 | 0.00 | 0.07 | |
| makeExampleData | 0.01 | 0.00 | 0.02 | |
| makeExampleDataWithUnequalGroups | 0 | 0 | 0 | |
| plotELBO | 0.18 | 0.01 | 0.19 | |
| plotGroupPenalties | 0.67 | 0.00 | 0.67 | |
| plotPosterior | 0.59 | 0.06 | 0.66 | |
| predict.graper | 2.19 | 0.02 | 2.23 | |
| print.graper | 0.06 | 0.00 | 0.06 | |