Marcel Ramos
| Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022) |
| git_url: https://git.bioconductor.org/packages/TCGAutils |
| git_branch: master |
| git_last_commit: d0157e8 |
| git_last_commit_date: 2022-03-16 17:59:47 -0400 (Wed, 16 Mar 2022) |
| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:08:50 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the TCGAutils package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/TCGAutils.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1944/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| TCGAutils 1.15.6 (landing page) Marcel Ramos
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | OK | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: TCGAutils |
| Version: 1.15.6 |
| Command: rm -rf TCGAutils.buildbin-libdir && mkdir TCGAutils.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=TCGAutils.buildbin-libdir TCGAutils_1.15.6.tar.gz |
| StartedAt: 2022-03-17 21:44:09 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 21:45:40 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 90.4 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: TCGAutils_1.15.6.zip |
| PackageFileSize: 494.4 KiB |
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### Running command:
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### rm -rf TCGAutils.buildbin-libdir && mkdir TCGAutils.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=TCGAutils.buildbin-libdir TCGAutils_1.15.6.tar.gz
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* installing *source* package 'TCGAutils' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'TCGAutils'
finding HTML links ... done
ID-translation html
TCGAbarcode html
TCGAbiospec html
TCGAprimaryTumors html
finding level-2 HTML links ... done
TCGAsampleSelect html
TCGAutils-package html
builds html
clinicalNames html
curatedTCGAData-helpers html
diseaseCodes html
findGRangesCols html
generateMap html
getFileName html
hidden-helpers html
imputeAssay html
makeGRangesListFromCopyNumber html
makeGRangesListFromExonFiles html
makeSummarizedExperimentFromGISTIC html
mergeColData html
oncoPrintTCGA html
sampleTypes html
simplifyTCGA html
trimColData html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'TCGAutils' as TCGAutils_1.15.6.zip
* DONE (TCGAutils)