Bernat Gel
| Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022) |
| git_url: https://git.bioconductor.org/packages/CopyNumberPlots |
| git_branch: master |
| git_last_commit: 9f4d690 |
| git_last_commit_date: 2021-10-26 12:51:20 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:07:15 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the CopyNumberPlots package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CopyNumberPlots.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 398/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| CopyNumberPlots 1.11.0 (landing page) Bernat Gel
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | OK | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: CopyNumberPlots |
| Version: 1.11.0 |
| Command: rm -rf CopyNumberPlots.buildbin-libdir && mkdir CopyNumberPlots.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=CopyNumberPlots.buildbin-libdir CopyNumberPlots_1.11.0.tar.gz |
| StartedAt: 2022-03-17 21:02:16 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 21:03:21 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 64.9 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: CopyNumberPlots_1.11.0.zip |
| PackageFileSize: 1005 KiB |
##############################################################################
##############################################################################
###
### Running command:
###
### rm -rf CopyNumberPlots.buildbin-libdir && mkdir CopyNumberPlots.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=CopyNumberPlots.buildbin-libdir CopyNumberPlots_1.11.0.tar.gz
###
##############################################################################
##############################################################################
* installing *source* package 'CopyNumberPlots' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'CopyNumberPlots'
finding HTML links ... done
EnsemblStyle html
UCSCStyle html
Ztree2Hclust html
colByCopyNumber html
computeHclustPlotOrder html
getBAFColumn html
getChrColumn html
getColumn html
getCopyNumberColors html
getCopyNumberColumn html
getEndColumn html
getIDColumn html
getLOHColumn html
getLRRColumn html
getPosColumn html
getSegmentValueColumn html
getStartColumn html
loadCopyNumberCalls html
loadCopyNumberCallsCNVkit html
loadCopyNumberCallsCnmops html
loadCopyNumberCallsDECoN html
loadCopyNumberCallsDNAcopy html
loadCopyNumberCallsPanelcnmops html
loadCopyNumberCallsSeg html
loadCopyNumberCallspennCNV html
loadSNPData html
loadSNPDataDNAcopy html
loadSNPDataFromVCF html
plotBAF html
finding level-2 HTML links ... done
plotCopyNumberCalls html
plotCopyNumberCallsAsLines html
plotCopyNumberSummary html
plotLRR html
plotSingleCellCopyNumberCalls html
plotSingleCellCopyNumberSummary html
prepareLabels html
readHDF5Ztree html
removeNAs html
transformChr html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'CopyNumberPlots' as CopyNumberPlots_1.11.0.zip
* DONE (CopyNumberPlots)