| Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:14 -0400 (Fri, 15 Oct 2021).
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To the developers/maintainers of the openPrimeR package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/openPrimeR.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1313/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| openPrimeR 1.14.0 (landing page) Matthias Döring
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: openPrimeR |
| Version: 1.14.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/openPrimeR_1.14.0.tar.gz && rm -rf openPrimeR.buildbin-libdir && mkdir openPrimeR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=openPrimeR.buildbin-libdir openPrimeR_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL openPrimeR_1.14.0.zip && rm openPrimeR_1.14.0.tar.gz openPrimeR_1.14.0.zip |
| StartedAt: 2021-10-14 08:38:04 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 08:40:38 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 153.2 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/openPrimeR_1.14.0.tar.gz && rm -rf openPrimeR.buildbin-libdir && mkdir openPrimeR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=openPrimeR.buildbin-libdir openPrimeR_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL openPrimeR_1.14.0.zip && rm openPrimeR_1.14.0.tar.gz openPrimeR_1.14.0.zip
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install for i386
* installing *source* package 'openPrimeR' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'openPrimeR'
finding HTML links ... done
AnalysisStats html
Data html
Input html
Output html
Plots html
PrimerDesign html
PrimerEval html
Primers-method html
Scoring html
Settings html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/openPrimeR.buildbin-libdir/00LOCK-openPrimeR/00new/openPrimeR/help/Settings.html
Templates-method html
TemplatesFunctions html
check_cvg_constraints html
create_report-Primers-Templates-method
html
create_report-list-list-method html
filterLimits-methods html
filters-methods html
get_cvg_stats-Primers-method html
get_cvg_stats-list-method html
openPrimeR-package html
plot_constraint-Primers-method html
plot_constraint-list-method html
plot_constraint_deviation-Primers-method
html
plot_constraint_deviation-list-method html
plot_constraint_fulfillment-Primers-method
html
plot_constraint_fulfillment-list-method
html
plot_cvg_constraints-Primers-method html
plot_cvg_constraints-list-method html
plot_primer_binding_regions-Primers-Templates-method
html
plot_primer_binding_regions-list-list-method
html
plot_primer_cvg-Primers-Templates-method
html
plot_primer_cvg-list-list-method html
plot_template_cvg-Primers-Templates-method
html
plot_template_cvg-list-list-method html
runTutorial html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'openPrimeR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'openPrimeR' as openPrimeR_1.14.0.zip
* DONE (openPrimeR)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'openPrimeR' successfully unpacked and MD5 sums checked