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This page was generated on 2021-10-15 15:06:24 -0400 (Fri, 15 Oct 2021).

BUILD BIN results for SWATH2stats on tokay2

To the developers/maintainers of the SWATH2stats package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SWATH2stats.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1877/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SWATH2stats 1.22.0  (landing page)
Peter Blattmann
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/SWATH2stats
git_branch: RELEASE_3_13
git_last_commit: 9dd20d3
git_last_commit_date: 2021-05-19 12:16:16 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    ERROR  
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: SWATH2stats
Version: 1.22.0
Command: rm -rf SWATH2stats.buildbin-libdir && mkdir SWATH2stats.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SWATH2stats.buildbin-libdir SWATH2stats_1.22.0.tar.gz
StartedAt: 2021-10-15 12:04:17 -0400 (Fri, 15 Oct 2021)
EndedAt: 2021-10-15 12:05:50 -0400 (Fri, 15 Oct 2021)
EllapsedTime: 93.2 seconds
RetCode: 0
Status:   OK  
PackageFile: SWATH2stats_1.22.0.zip
PackageFileSize: 3.179 MiB

Command output

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###
### Running command:
###
###   rm -rf SWATH2stats.buildbin-libdir && mkdir SWATH2stats.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SWATH2stats.buildbin-libdir SWATH2stats_1.22.0.tar.gz
###
##############################################################################
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install for i386

* installing *source* package 'SWATH2stats' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'SWATH2stats'
    finding HTML links ... done
    JPP_update                              html  
    MSstats_data                            html  
    OpenSWATH_data                          html  
    Spyogenes                               html  
    Study_design                            html  
    add_genesymbol                          html  
    assess_decoy_rate                       html  
    assess_fdr_byrun                        html  
    assess_fdr_overall                      html  
    convert4MSstats                         html  
    convert4PECA                            html  
    convert4aLFQ                            html  
    convert4mapDIA                          html  
    convert4pythonscript                    html  
    convert_protein_ids                     html  
    count_analytes                          html  
    disaggregate                            html  
    filter_all_peptides                     html  
    filter_mscore                           html  
    filter_mscore_condition                 html  
    filter_mscore_fdr                       html  
    filter_mscore_freqobs                   html  
    filter_on_max_peptides                  html  
    filter_on_min_peptides                  html  
    filter_proteotypic_peptides             html  
    import_data                             html  
    load_mart                               html  
    mscore4assayfdr                         html  
    mscore4pepfdr                           html  
    mscore4protfdr                          html  
    plot.fdr_cube                           html  
    plot.fdr_table                          html  
    plot_correlation_between_samples        html  
    plot_variation                          html  
    plot_variation_vs_total                 html  
    reduce_OpenSWATH_output                 html  
    removeDecoyProteins                     html  
    rmDecoyProt                             html  
    sample_annotation                       html  
    transform_MSstats_OpenSWATH             html  
    unifyProteinGroupLabels                 html  
    validate_columns                        html  
    write_matrix_peptides                   html  
    write_matrix_proteins                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'SWATH2stats' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SWATH2stats' as SWATH2stats_1.22.0.zip
* DONE (SWATH2stats)