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This page was generated on 2021-10-15 15:06:12 -0400 (Fri, 15 Oct 2021).

BUILD results for MoonlightR on tokay2

To the developers/maintainers of the MoonlightR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MoonlightR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1178/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MoonlightR 1.18.0  (landing page)
Antonio Colaprico
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/MoonlightR
git_branch: RELEASE_3_13
git_last_commit: d01eece
git_last_commit_date: 2021-05-19 12:23:48 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    ERROR  skipped
tokay2Windows Server 2012 R2 Standard / x64  OK    ERROR  skippedskipped
machv2macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: MoonlightR
Version: 1.18.0
Command: chmod a+r MoonlightR -R && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data MoonlightR
StartedAt: 2021-10-14 15:51:04 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 15:53:05 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 121.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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###
### Running command:
###
###   chmod a+r MoonlightR -R && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data MoonlightR
###
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* checking for file 'MoonlightR/DESCRIPTION' ... OK
* preparing 'MoonlightR':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'Moonlight.Rmd' using rmarkdown
i Loading MoonlightR
Loading required package: doParallel
Loading required package: foreach
Loading required package: iterators
Loading required package: parallel

Setting options('download.file.method.GEOquery'='auto')
Setting options('GEOquery.inmemory.gpl'=FALSE)
Quitting from lines 668-671 (Moonlight.Rmd) 
Error: processing vignette 'Moonlight.Rmd' failed with diagnostics:
attempt to use zero-length variable name
--- failed re-building 'Moonlight.Rmd'

SUMMARY: processing the following file failed:
  'Moonlight.Rmd'

Error: Vignette re-building failed.
Execution halted