Wanding Zhou
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/sesame |
| Branch: RELEASE_3_12 |
| Last Commit: 37a1f75 |
| Last Changed Date: 2021-04-29 15:57:06 -0400 (Thu, 29 Apr 2021) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:33:35 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the sesame package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1689/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| sesame 1.8.12 (landing page) Wanding Zhou
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | ERROR | skipped | skipped | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: sesame |
| Version: 1.8.12 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/sesame_1.8.12.tar.gz && rm -rf sesame.buildbin-libdir && mkdir sesame.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sesame.buildbin-libdir sesame_1.8.12.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL sesame_1.8.12.zip && rm sesame_1.8.12.tar.gz sesame_1.8.12.zip |
| StartedAt: 2021-05-05 17:47:02 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 17:48:20 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 78.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/sesame_1.8.12.tar.gz && rm -rf sesame.buildbin-libdir && mkdir sesame.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sesame.buildbin-libdir sesame_1.8.12.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL sesame_1.8.12.zip && rm sesame_1.8.12.tar.gz sesame_1.8.12.zip
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install for i386
* installing *source* package 'sesame' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'sesame'
finding HTML links ... done
BetaValueToMValue html
DML html
DMLShrinkage html
DMR html
IG-methods html
IG-replace-methods html
IGpass html
II-methods html
II-replace-methods html
IIpass html
IR-methods html
IR-replace-methods html
IRpass html
MValueToBetaValue html
RGChannelSetToSigSets html
SNPcheck html
SigSet-class html
SigSetList-class html
SigSetList-methods html
SigSetList html
SigSetListFromIDATs html
SigSetListFromPath html
SigSetToRatioSet html
SigSetsToRGChannelSet html
as.data.frame.sesameQC html
bSubComplete html
bSubMostVariable html
bSubProbes html
betaToAF html
binSignals html
bisConversionControl html
buildControlMatrix450k html
checkLevels html
chipAddressToSignal html
cnSegmentation html
compareMouseBloodReference html
compareMouseTissueReference html
createUCSCtrack html
ctl-methods html
ctl-replace-methods html
deidentify html
detectionMask html
detectionPfixedNorm html
detectionPnegEcdf html
detectionPnegNorm html
detectionPnegNormGS html
detectionPnegNormTotal html
detectionPoobEcdf html
detectionPoobEcdf2 html
detectionZero html
diffRefSet html
dyeBiasCorr html
dyeBiasCorrMostBalanced html
dyeBiasCorrTypeINorm html
estimateCellComposition html
estimateLeukocyte html
extra-methods html
extra-replace-methods html
extractDesign html
formatVCF html
getAFTypeIbySumAlleles html
getAutosomeProbes html
getBetas html
getBinCoordinates html
getNormCtls html
getProbesByChromosome html
getProbesByGene html
getProbesByRegion html
getProbesByTSS html
getRefSet html
getSexInfo html
inferEthnicity html
inferSex html
inferSexKaryotypes html
inferStrain html
inferTypeIChannel html
initFileSet html
isUniqProbeID html
makeExampleSeSAMeDataSet html
makeExampleTinyEPICDataSet html
mapFileSet html
meanIntensity html
noob html
noobsb html
oobG-methods html
oobG-replace-methods html
oobGpass html
oobR-methods html
oobR-replace-methods html
oobRpass html
openSesame html
openSesameToFile html
parseGEOSignalABFile html
predictAgeHorvath353 html
predictAgePheno html
predictAgeSkinBlood html
predictMouseAgeInMonth html
print.fileSet html
print.sesameQC html
probeID_designType html
probeNames-methods html
pval-methods html
pval-replace-methods html
qualityMask html
qualityRank html
reIdentify html
readFileSet html
readIDATpair html
reopenSesame html
resetMask html
restoreMask html
saveMask html
scrub html
scrubSoft html
searchIDATprefixes html
segmentBins html
sesame-package html
sesameQC html
sesamize html
show-methods html
signalMU html
sliceFileSet html
subsetSignal html
summaryExtractCfList html
summaryExtractSlope html
topSegments html
totalIntensities html
totalIntensityZscore html
twoCompsEst2 html
visualizeGene html
visualizeProbes html
visualizeRegion html
visualizeSegments html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'sesame' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'sesame' as sesame_1.8.12.zip
* DONE (sesame)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'sesame' successfully unpacked and MD5 sums checked