Alper Kucukural
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/debrowser |
| Branch: RELEASE_3_12 |
| Last Commit: 8dbbe8b |
| Last Changed Date: 2021-04-23 12:57:32 -0400 (Fri, 23 Apr 2021) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:30:36 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the debrowser package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 435/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| debrowser 1.18.3 (landing page) Alper Kucukural
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: debrowser |
| Version: 1.18.3 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/debrowser_1.18.3.tar.gz && rm -rf debrowser.buildbin-libdir && mkdir debrowser.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=debrowser.buildbin-libdir debrowser_1.18.3.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL debrowser_1.18.3.zip && rm debrowser_1.18.3.tar.gz debrowser_1.18.3.zip |
| StartedAt: 2021-05-05 19:19:23 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 19:21:41 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 138.2 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/debrowser_1.18.3.tar.gz && rm -rf debrowser.buildbin-libdir && mkdir debrowser.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=debrowser.buildbin-libdir debrowser_1.18.3.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL debrowser_1.18.3.zip && rm debrowser_1.18.3.tar.gz debrowser_1.18.3.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 2472k 100 2472k 0 0 34.8M 0 --:--:-- --:--:-- --:--:-- 35.5M
install for i386
* installing *source* package 'debrowser' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'debrowser'
finding HTML links ... done
BoxMainPlotControlsUI html
IQRPlotControlsUI html
actionButtonDE html
addDataCols html
addID html
all2all html
all2allControlsUI html
applyFilters html
applyFiltersNew html
applyFiltersToMergedComparison html
barMainPlotControlsUI html
batchEffectUI html
batchMethod html
changeClusterOrder html
checkCountData html
checkMetaData html
clustFunParamsUI html
clusterData html
compareClust html
condSelectUI html
correctCombat html
correctHarman html
customColorsUI html
cutOffSelectionUI html
dataLCFUI html
dataLoadUI html
deServer html
deUI html
debrowserIQRplot html
debrowserall2all html
debrowserbarmainplot html
debrowserbatcheffect html
debrowserboxmainplot html
debrowsercondselect html
debrowserdataload html
debrowserdeanalysis html
debrowserdensityplot html
debrowserheatmap html
debrowserhistogram html
debrowserlowcountfilter html
debrowsermainplot html
debrowserpcaplot html
dendControlsUI html
densityPlotControlsUI html
distFunParamsUI html
drawKEGG html
drawPCAExplained html
fileTypes html
fileUploadBox html
generateTestData html
getAfterLoadMsg html
getAll2AllPlotUI html
getBSTableUI html
getBarMainPlot html
getBarMainPlotUI html
getBoxMainPlot html
getBoxMainPlotUI html
getColorShapeSelection html
getColors html
getCompSelection html
getCondMsg html
getConditionSelector html
getConditionSelectorFromMeta html
getCutOffSelection html
getDEAnalysisText html
getDEResultsUI html
getDataAssesmentText html
getDataForTables html
getDataPreparationText html
getDensityPlot html
getDensityPlotUI html
getDomains html
getDown html
getDownloadSection html
getEnrichDO html
getEnrichGO html
getEnrichKEGG html
getEntrezIds html
getEntrezTable html
getGOLeftMenu html
getGOPlots html
getGSEA html
getGeneList html
getGeneSetData html
getGoPanel html
getHeatmapUI html
getHelpButton html
getHideLegendOnOff html
getHistogramUI html
getIQRPlot html
getIQRPlotUI html
getIntroText html
getJSLine html
getKEGGModal html
getLeftMenu html
getLegendColors html
getLegendRadio html
getLegendSelect html
getLevelOrder html
getLoadingMsg html
getLogo html
getMainPanel html
getMainPlotUI html
getMainPlotsLeftMenu html
getMean html
getMergedComparison html
getMetaSelector html
getMethodDetails html
getMostVariedList html
getNormalizedMatrix html
getOrganism html
getOrganismBox html
getOrganismPathway html
getPCAPlotUI html
getPCAcontolUpdatesJS html
getPCAexplained html
getPCselection html
getPlotArea html
getProgramTitle html
getQAText html
getQCLeftMenu html
getQCPanel html
getSampleDetails html
getSampleNames html
getSamples html
getSearchData html
getSelHeat html
getSelectInputBox html
getSelectedCols html
getSelectedDatasetInput html
getShapeColor html
getStartPlotsMsg html
getStartupMsg html
getTabUpdateJS html
getTableDetails html
getTableModal html
getTableStyle html
getTextOnOff html
getUp html
getUpDown html
getVariationData html
get_conditions_given_selection html
heatmapControlsUI html
heatmapJScode html
heatmapServer html
heatmapUI html
hideObj html
histogramControlsUI html
installpack html
kmeansControlsUI html
lcfMetRadio html
loadpack html
mainPlotControlsUI html
mainScatterNew html
niceKmeans html
normalizationMethods html
palUI html
panel.cor html
panel.hist html
pcaPlotControlsUI html
plotData html
plotMarginsUI html
plotSizeMarginsUI html
plotSizeUI html
plotTypeUI html
plot_pca html
prepDEOutput html
prepDataContainer html
prepGroup html
prepHeatData html
prepPCADat html
push html
removeCols html
removeExtraCols html
round_vals html
runDE html
runDESeq2 html
runEdgeR html
runHeatmap html
runHeatmap2 html
runLimma html
run_pca html
selectConditions html
selectGroupInfo html
selectedInput html
sepRadio html
setBatch html
showObj html
startDEBrowser html
startHeatmap html
textareaInput html
togglePanels html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'debrowser' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'debrowser' as debrowser_1.18.3.zip
* DONE (debrowser)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'debrowser' successfully unpacked and MD5 sums checked