Back to Multiple platform build/check report for BioC 3.12 |
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This page was generated on 2021-05-06 12:27:50 -0400 (Thu, 06 May 2021).
To the developers/maintainers of the GSVA package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 802/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
GSVA 1.38.2 (landing page) Justin Guinney
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: GSVA |
Version: 1.38.2 |
Command: /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL GSVA |
StartedAt: 2021-05-05 16:52:02 -0400 (Wed, 05 May 2021) |
EndedAt: 2021-05-05 16:52:26 -0400 (Wed, 05 May 2021) |
EllapsedTime: 24.0 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL GSVA ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.12-bioc/R/library’ * installing *source* package ‘GSVA’ ... ** using staged installation ** libs gcc -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c kernel_estimation.c -o kernel_estimation.o gcc -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c ks_test.c -o ks_test.o ks_test.c: In function ‘ks_sample’: ks_test.c:24:9: warning: unused variable ‘mx_value’ [-Wunused-variable] double mx_value = 0.0; ^~~~~~~~ gcc -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c register_cmethods.c -o register_cmethods.o gcc -shared -L/home/biocbuild/bbs-3.12-bioc/R/lib -L/usr/local/lib -o GSVA.so kernel_estimation.o ks_test.o register_cmethods.o -L/home/biocbuild/bbs-3.12-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.12-bioc/R/library/00LOCK-GSVA/00new/GSVA/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GSVA)