| Back to Build/check report for BioC 3.11 experimental data |
This page was generated on 2020-10-15 20:45:48 -0400 (Thu, 15 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE Illumina450ProbeVariants.db PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 184/391 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||
| Illumina450ProbeVariants.db 1.24.0 Tiffany Morris
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | [ OK ] |
| Package: Illumina450ProbeVariants.db |
| Version: 1.24.0 |
| Command: /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD check --install=check:Illumina450ProbeVariants.db.install-out.txt --library=/home/biocbuild/bbs-3.11-bioc/R/library --no-vignettes --timings Illumina450ProbeVariants.db_1.24.0.tar.gz |
| StartedAt: 2020-10-15 13:33:54 -0400 (Thu, 15 Oct 2020) |
| EndedAt: 2020-10-15 13:34:18 -0400 (Thu, 15 Oct 2020) |
| EllapsedTime: 23.4 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: Illumina450ProbeVariants.db.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD check --install=check:Illumina450ProbeVariants.db.install-out.txt --library=/home/biocbuild/bbs-3.11-bioc/R/library --no-vignettes --timings Illumina450ProbeVariants.db_1.24.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.11-data-experiment/meat/Illumina450ProbeVariants.db.Rcheck’
* using R version 4.0.3 (2020-10-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘Illumina450ProbeVariants.db/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘Illumina450ProbeVariants.db’ version ‘1.24.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘Illumina450ProbeVariants.db’ can be installed ... OK
* checking installed package size ... NOTE
installed size is 6.5Mb
sub-directories of 1Mb or more:
data 6.4Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.11-data-experiment/meat/Illumina450ProbeVariants.db.Rcheck/00check.log’
for details.
Illumina450ProbeVariants.db.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD INSTALL Illumina450ProbeVariants.db ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.11-bioc/R/library’ * installing *source* package ‘Illumina450ProbeVariants.db’ ... ** using staged installation ** data ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Illumina450ProbeVariants.db)
Illumina450ProbeVariants.db.Rcheck/Illumina450ProbeVariants.db-Ex.timings
| name | user | system | elapsed | |
| probe.450K.VCs.af | 1.509 | 0.047 | 1.557 | |