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### Running command:
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###   chmod a+r Rgraphviz -R && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data Rgraphviz
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* checking for file 'Rgraphviz/DESCRIPTION' ... OK
* preparing 'Rgraphviz':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running 'cleanup.win'
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'Rgraphviz.Rnw' using Sweave
Loading required package: graph
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colnames, dirname, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
    pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
    tapply, union, unique, unsplit, which, which.max, which.min

Loading required package: grid

Attaching package: 'XML'

The following object is masked from 'package:graph':

    addNode

Warning in system(paste(shQuote(texi2dvi), if (quiet) "--quiet" else "",  :
  running command '"C:\PROGRA~1\MIKTEX~1.9\miktex\bin\x64\texify.exe" --quiet --pdf "Rgraphviz.tex" --max-iterations=20 -I "C:/Users/bioctesting/bbs-3.11-bioc-testing/R/share/texmf/tex/latex" -I "C:/Users/bioctesting/bbs-3.11-bioc-testing/R/share/texmf/bibtex/bst"' had status 1
Error: processing vignette 'Rgraphviz.Rnw' failed with diagnostics:
Failed to locate 'texi2pdf' output file 'Rgraphviz.pdf' for vignette with name 'Rgraphviz' and engine 'utils::Sweave'. The following files exist in working directory 'C:\Users\bioctesting\bbs-3.11-bioc-testing\tmpdir\RtmpY3AAbH\Rbuild1a8c51f1d2a\Rgraphviz\vignettes': 'Rgraphviz-cGdot.pdf' (13832 bytes), 'Rgraphviz-cGneato.pdf' (9204 bytes), 'Rgraphviz-cGtwopi.pdf' (9634 bytes), 'Rgraphviz.Rnw' (31436 bytes), 'Rgraphviz.tex' (38399 bytes), 'Rplots.pdf' (16384 bytes), 'defAttrs2.pdf' (6357 bytes), 'edgeWeightLabels.pdf' (16385 bytes), 'figColors.pdf' (15601 bytes), 'figLabels.pdf' (16096 bytes), 'figNodeShapes.pdf' (11747 bytes), 'figbipartite.pdf' (18445 bytes), 'graph17.pdf' (13886 bytes), 'newRgraphvizInterface.Rnw' (21453 bytes), 'pieChartGraph.pdf' (18298 bytes), 'plotDot.pdf' (6307 bytes), 'plotNeato.pdf' (5555 bytes), 'plotTwopi.pdf' (6112 bytes), 'plotbuild.pdf' (7191 bytes), 'recipEdgesComb.pdf' (4154 bytes), 'recipEdgesDistinct.pdf' (4252 bytes), 'subGPlot2.pdf' (6870 bytes), 'subGplot.pdf' (6376 bytes), 'test_twopi.dot' (2592 bytes)
--- failed re-building 'Rgraphviz.Rnw'

--- re-building 'newRgraphvizInterface.Rnw' using Sweave
Warning in drawEdges(x) :
  Unknown or unsupported arrowhead type. Using default instead.
Warning in drawEdges(x) :
  Unknown or unsupported arrowhead type. Using default instead.
Warning in system(paste(shQuote(texi2dvi), if (quiet) "--quiet" else "",  :
  running command '"C:\PROGRA~1\MIKTEX~1.9\miktex\bin\x64\texify.exe" --quiet --pdf "newRgraphvizInterface.tex" --max-iterations=20 -I "C:/Users/bioctesting/bbs-3.11-bioc-testing/R/share/texmf/tex/latex" -I "C:/Users/bioctesting/bbs-3.11-bioc-testing/R/share/texmf/bibtex/bst"' had status 1
Error: processing vignette 'newRgraphvizInterface.Rnw' failed with diagnostics:
Failed to locate 'texi2pdf' output file 'newRgraphvizInterface.pdf' for vignette with name 'newRgraphvizInterface' and engine 'utils::Sweave'. The following files exist in working directory 'C:\Users\bioctesting\bbs-3.11-bioc-testing\tmpdir\RtmpY3AAbH\Rbuild1a8c51f1d2a\Rgraphviz\vignettes': 'Rgraphviz-cGdot.pdf' (13832 bytes), 'Rgraphviz-cGneato.pdf' (9204 bytes), 'Rgraphviz-cGtwopi.pdf' (9634 bytes), 'Rgraphviz.R' (13098 bytes), 'Rgraphviz.Rnw' (31436 bytes), 'Rgraphviz.tex' (38399 bytes), 'Rplots.pdf' (16384 bytes), 'defAttrs2.pdf' (6357 bytes), 'edgeWeightLabels.pdf' (16385 bytes), 'figColors.pdf' (15601 bytes), 'figLabels.pdf' (16096 bytes), 'figNodeShapes.pdf' (11747 bytes), 'figbipartite.pdf' (18445 bytes), 'graph17.pdf' (13886 bytes), 'newRgraphvizInterface-arrowheads.pdf' (8745 bytes), 'newRgraphvizInterface-bgandfontcol.pdf' (6274 bytes), 'newRgraphvizInterface-createGraph1.pdf' (6273 bytes), 'newRgraphvizInterface-edgePars.pdf' (7260 bytes), 'newRgraphvizInterface-edgepardefs.pdf' (6286 bytes), 'newRgraphvizInterface-graphpardefs.pdf' (7224 bytes), 'newRgraphvizInterface-labels.pdf' (7106 bytes), 'newRgraphvizInterface-nodePars.pdf' (7237 bytes), 'newRgraphvizInterface-nodepardefs.pdf' (6281 bytes), 'newRgraphvizInterface-nshape.pdf' (9842 bytes), 'newRgraphvizInterface-programParms.pdf' (7264 bytes), 'newRgraphvizInterface-reset.pdf' (7246 bytes), 'newRgraphvizInterface-setallatonce.pdf' (7231 bytes), 'newRgraphvizInterface-tweaklabesl.pdf' (7109 bytes), 'newRgraphvizInterface-userDefinedEdge.pdf' (8907 bytes), 'newRgraphvizInterface-userDefinedNode.pdf' (8038 bytes), 'newRgraphvizInterface.Rnw' (21453 bytes), 'newRgraphvizInterface.tex' (24015 bytes), 'pieChartGraph.pdf' (18298 bytes), 'plotDot.pdf' (6307 bytes), 'plotNeato.pdf' (5555 bytes), 'plotTwopi.pdf' (6112 bytes), 'plotbuild.pdf' (7191 bytes), 'recipEdgesComb.pdf' (4154 bytes), 'recipEdgesDistinct.pdf' (4252 bytes), 'subGPlot2.pdf' (6870 bytes), 'subGplot.pdf' (6376 bytes), 'test_twopi.dot' (2592 bytes)
--- failed re-building 'newRgraphvizInterface.Rnw'

SUMMARY: processing the following files failed:
  'Rgraphviz.Rnw' 'newRgraphvizInterface.Rnw'

Error: Vignette re-building failed.
Execution halted