Mohammed OE Abdallah
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/cellbaseR |
| Branch: RELEASE_3_11 |
| Last Commit: 559afc7 |
| Last Changed Date: 2020-04-27 15:07:27 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:13 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE cellbaseR PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 246/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| cellbaseR 1.12.0 Mohammed OE Abdallah
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: cellbaseR |
| Version: 1.12.0 |
| Command: rm -rf cellbaseR.buildbin-libdir && mkdir cellbaseR.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cellbaseR.buildbin-libdir cellbaseR_1.12.0.tar.gz |
| StartedAt: 2020-10-17 10:02:42 -0400 (Sat, 17 Oct 2020) |
| EndedAt: 2020-10-17 10:03:21 -0400 (Sat, 17 Oct 2020) |
| EllapsedTime: 39.8 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: cellbaseR_1.12.0.zip |
| PackageFileSize: 757.2 KiB |
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### Running command:
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### rm -rf cellbaseR.buildbin-libdir && mkdir cellbaseR.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cellbaseR.buildbin-libdir cellbaseR_1.12.0.tar.gz
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install for i386
* installing *source* package 'cellbaseR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'cellbaseR'
finding HTML links ... done
AnnotateVcf-CellBaseR-method html
CellBaseParam-class html
CellBaseParam html
CellBaseR-class html
CellBaseR html
cellbaseR-package html
createGeneModel html
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpkBTt5h/R.INSTALL1fa026a63ba2/cellbaseR/man/createGeneModel.Rd:23: file link 'GeneRegionTrack' in package 'Gviz' does not exist and so has been treated as a topic
getCaddScores html
getCellBase-CellBaseR-method html
getCellBaseResourceHelp html
getChromosomeInfo-CellBaseR-method html
getClinical-CellBaseR-method html
getClinicalByGene html
getClinicalByRegion html
getConservationByRegion html
getGene-CellBaseR-method html
getGeneInfo html
getMeta-CellBaseR-method html
getProtein-CellBaseR-method html
getProteinInfo html
getRegion-CellBaseR-method html
getRegulatoryByRegion html
getSnp-CellBaseR-method html
getSnpByGene html
getTf-CellBaseR-method html
getTfbsByRegion html
getTranscript-CellBaseR-method html
getTranscriptByGene html
getVariant-CellBaseR-method html
getVariantAnnotation html
getXref-CellBaseR-method html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'cellbaseR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'cellbaseR' as cellbaseR_1.12.0.zip
* DONE (cellbaseR)