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### Running command:
###
###   C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:Xeva.install-out.txt --library=C:\Users\biocbuild\bbs-3.11-bioc\R\library --no-vignettes --timings Xeva_1.4.0.tar.gz
###
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* using log directory 'C:/Users/biocbuild/bbs-3.11-bioc/meat/Xeva.Rcheck'
* using R version 4.0.3 (2020-10-10)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'Xeva/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'Xeva' version '1.4.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'Xeva' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... NOTE
  Note: found 31 marked UTF-8 strings
* checking data for ASCII and uncompressed saves ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  'C:/Users/biocbuild/bbs-3.11-bioc/meat/Xeva.Rcheck/00check.log'
for details.

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/Xeva_1.4.0.tar.gz && rm -rf Xeva.buildbin-libdir && mkdir Xeva.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Xeva.buildbin-libdir Xeva_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL Xeva_1.4.0.zip && rm Xeva_1.4.0.tar.gz Xeva_1.4.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0  764k    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  764k  100  764k    0     0  3632k      0 --:--:-- --:--:-- --:--:-- 3728k

install for i386

* installing *source* package 'Xeva' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Xeva'
    finding HTML links ... done
    ABC                                     html  
    AUC                                     html  
    PDXMI                                   html  
    TGI                                     html  
    addExperimentalDesign                   html  
    angle                                   html  
    batchInfo                               html  
    brca                                    html  
    createXevaSet                           html  
    dosePlot                                html  
    downloadXevaSet                         html  
    drugInform                              html  
    drugSensitivitySig                      html  
    getExperiment                           html  
    getMolecularProfiles                    html  
    lmm                                     html  
    mRECIST                                 html  
    modelInfo                               html  
    plotPDX                                 html  
    plotmRECIST                             html  
    print.batchResponse                     html  
    print.modelResponse                     html  
    print.pdxBatch                          html  
    repdx                                   html  
    response                                html  
    selectModelIds                          html  
    sensitivity                             html  
    setResponse                             html  
    slope                                   html  
    subsetXeva                              html  
    summarizeMolecularProfiles              html  
    summarizeResponse                       html  
    waterfall                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'Xeva' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Xeva' as Xeva_1.4.0.zip
* DONE (Xeva)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'Xeva' successfully unpacked and MD5 sums checked