Zhezhen Wang
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/BioTIP |
| Branch: RELEASE_3_11 |
| Last Commit: 8c08cc8 |
| Last Changed Date: 2020-04-27 15:30:56 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:10 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE BioTIP PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 184/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| BioTIP 1.2.0 Zhezhen Wang
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |
| Package: BioTIP |
| Version: 1.2.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/BioTIP_1.2.0.tar.gz && rm -rf BioTIP.buildbin-libdir && mkdir BioTIP.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BioTIP.buildbin-libdir BioTIP_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL BioTIP_1.2.0.zip && rm BioTIP_1.2.0.tar.gz BioTIP_1.2.0.zip |
| StartedAt: 2020-10-16 18:54:53 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 18:55:42 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 49.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/BioTIP_1.2.0.tar.gz && rm -rf BioTIP.buildbin-libdir && mkdir BioTIP.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BioTIP.buildbin-libdir BioTIP_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL BioTIP_1.2.0.zip && rm BioTIP_1.2.0.tar.gz BioTIP_1.2.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 2822k 100 2822k 0 0 17.9M 0 --:--:-- --:--:-- --:--:-- 18.7M
install for i386
* installing *source* package 'BioTIP' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
Warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYbmDZw/R.INSTALL2168314f7608/BioTIP/man/optimize.sd_selection.Rd:40: unknown macro '\item'
Warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYbmDZw/R.INSTALL2168314f7608/BioTIP/man/optimize.sd_selection.Rd:52: unknown macro '\item'
Warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYbmDZw/R.INSTALL2168314f7608/BioTIP/man/optimize.sd_selection.Rd:55: unknown macro '\item'
Warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYbmDZw/R.INSTALL2168314f7608/BioTIP/man/optimize.sd_selection.Rd:58: unexpected section header '\value'
Warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYbmDZw/R.INSTALL2168314f7608/BioTIP/man/optimize.sd_selection.Rd:63: unexpected section header '\description'
Warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYbmDZw/R.INSTALL2168314f7608/BioTIP/man/optimize.sd_selection.Rd:68: unexpected section header '\examples'
Warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYbmDZw/R.INSTALL2168314f7608/BioTIP/man/optimize.sd_selection.Rd:78: unexpected section header '\seealso'
Warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYbmDZw/R.INSTALL2168314f7608/BioTIP/man/optimize.sd_selection.Rd:81: unexpected section header '\author'
Warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYbmDZw/R.INSTALL2168314f7608/BioTIP/man/optimize.sd_selection.Rd:84: unexpected END_OF_INPUT '
'
Warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYbmDZw/R.INSTALL2168314f7608/BioTIP/man/sd_selection.Rd:29: unknown macro '\item'
Warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYbmDZw/R.INSTALL2168314f7608/BioTIP/man/sd_selection.Rd:41: unknown macro '\item'
Warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYbmDZw/R.INSTALL2168314f7608/BioTIP/man/sd_selection.Rd:44: unknown macro '\item'
Warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYbmDZw/R.INSTALL2168314f7608/BioTIP/man/sd_selection.Rd:47: unexpected section header '\value'
Warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYbmDZw/R.INSTALL2168314f7608/BioTIP/man/sd_selection.Rd:54: unexpected section header '\description'
Warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYbmDZw/R.INSTALL2168314f7608/BioTIP/man/sd_selection.Rd:61: unexpected section header '\examples'
Warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYbmDZw/R.INSTALL2168314f7608/BioTIP/man/sd_selection.Rd:71: unexpected section header '\seealso'
Warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYbmDZw/R.INSTALL2168314f7608/BioTIP/man/sd_selection.Rd:74: unexpected section header '\author'
Warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYbmDZw/R.INSTALL2168314f7608/BioTIP/man/sd_selection.Rd:77: unexpected END_OF_INPUT '
'
*** installing help indices
converting help for package 'BioTIP'
finding HTML links ... done
BioTIP-package html
GSE6136_cli html
GSE6136_matrix html
ILEF html
avg.cor.shrink html
cod html
cor.shrink html
gencode html
getBiotypes html
getCTS html
getCluster_methods html
getIc html
getIc.new html
getMCI html
finding level-2 HTML links ... done
getMCI_inner html
getMaxMCImember html
getMaxStats html
getNetwork html
getReadthrough html
intron html
optimize.sd_selection html
plotBar_MCI html
plotIc html
plotMaxMCI html
plot_Ic_Simulation html
plot_MCI_Simulation html
plot_SS_Simulation html
sd_selection html
simulationMCI html
simulation_Ic html
simulation_Ic_sample html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'BioTIP' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BioTIP' as BioTIP_1.2.0.zip
* DONE (BioTIP)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'BioTIP' successfully unpacked and MD5 sums checked