Daniel Castillo Secilla
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/KnowSeq |
| Branch: RELEASE_3_10 |
| Last Commit: 9f19e01 |
| Last Changed Date: 2020-02-13 15:39:36 -0400 (Thu, 13 Feb 2020) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:32:43 -0400 (Wed, 15 Apr 2020).
| Package 894/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| KnowSeq 1.0.0 Daniel Castillo Secilla
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: KnowSeq |
| Version: 1.0.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/KnowSeq_1.0.0.tar.gz && rm -rf KnowSeq.buildbin-libdir && mkdir KnowSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=KnowSeq.buildbin-libdir KnowSeq_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL KnowSeq_1.0.0.zip && rm KnowSeq_1.0.0.tar.gz KnowSeq_1.0.0.zip |
| StartedAt: 2020-04-14 20:40:15 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 20:41:26 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 71.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/KnowSeq_1.0.0.tar.gz && rm -rf KnowSeq.buildbin-libdir && mkdir KnowSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=KnowSeq.buildbin-libdir KnowSeq_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL KnowSeq_1.0.0.zip && rm KnowSeq_1.0.0.tar.gz KnowSeq_1.0.0.zip
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install for i386
* installing *source* package 'KnowSeq' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
groupGOTerms: GOBPTerm, GOMFTerm, GOCCTerm environments built.
** help
*** installing help indices
converting help for package 'KnowSeq'
finding HTML links ... done
DEGsPathwayVisualization html
finding level-2 HTML links ... done
DEGsToDiseases html
RNAseqQA html
batchEffectRemoval html
calculateGeneExpressionValues html
countsToMatrix html
dataPlot html
downloadPublicSeries html
featureSelection html
fileMove html
gdcClientDownload html
geneOntologyEnrichment html
getAnnotationFromEnsembl html
hisatAlignment html
kallistoAlignment html
knn_CV html
knn_test html
limmaDEGsExtraction html
plotConfMatrix html
rawAlignment html
rf_CV html
rf_test html
salmonAlignment html
sraToFastq html
svm_CV html
svm_test html
tophatAlignment html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
groupGOTerms: GOBPTerm, GOMFTerm, GOCCTerm environments built.
** testing if installed package can be loaded from final location
groupGOTerms: GOBPTerm, GOMFTerm, GOCCTerm environments built.
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'KnowSeq' ...
** testing if installed package can be loaded
groupGOTerms: GOBPTerm, GOMFTerm, GOCCTerm environments built.
* MD5 sums
packaged installation of 'KnowSeq' as KnowSeq_1.0.0.zip
* DONE (KnowSeq)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'KnowSeq' successfully unpacked and MD5 sums checked