bgx 1.6.0
Ernest Turro
| Bioconductor Changelog | | Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/bgx | | Last Changed Rev: 34811 / Revision: 38965 | | Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | [ OK ] |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.6) / i386 | OK | OK | OK |
installing R.css in E:/biocbld/bbs-2.3-bioc/meat/bgx.buildbin-libdir
Using auto-selected zip options ''
---------- Making package bgx ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
making DLL ...
making qnorm.d from qnorm.c
making bgx.d from bgx.cc
making bgx_frontend.d from bgx_frontend.cc
making rundir.d from rundir.cc
making sokal.d from sokal.cc
gcc -std=gnu99 -I ../boostIncl -IE:/biocbld/bbs-2.3-bioc/R/include -DUSING_R -march=i486 -ffast-math -O3 -std=c99 -O3 -Wall -c qnorm.c -o qnorm.o
g++ -I ../boostIncl -IE:/biocbld/bbs-2.3-bioc/R/include -DUSING_R -march=i486 -ffast-math -O3 -O2 -Wall -c bgx.cc -o bgx.o
g++ -I ../boostIncl -IE:/biocbld/bbs-2.3-bioc/R/include -DUSING_R -march=i486 -ffast-math -O3 -O2 -Wall -c bgx_frontend.cc -o bgx_frontend.o
g++ -I ../boostIncl -IE:/biocbld/bbs-2.3-bioc/R/include -DUSING_R -march=i486 -ffast-math -O3 -O2 -Wall -c rundir.cc -o rundir.o
g++ -I ../boostIncl -IE:/biocbld/bbs-2.3-bioc/R/include -DUSING_R -march=i486 -ffast-math -O3 -O2 -Wall -c sokal.cc -o sokal.o
windres --preprocessor="gcc -E -xc -DRC_INVOKED" -I E:/biocbld/bbs-2.3-bioc/R/include -i bgx_res.rc -o bgx_res.o
g++ -shared -s -o bgx.dll bgx.def qnorm.o bgx.o bgx_frontend.o rundir.o sokal.o bgx_res.o -LE:/biocbld/bbs-2.3-bioc/R/bin -lR
... DLL made
installing DLL
installing R files
installing inst files
preparing package bgx for lazy loading
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: affy
Loading required package: gcrma
Loading required package: matchprobes
Loading required package: splines
installing man source files
installing indices
installing help
>>> Building/Updating help pages for package 'bgx'
Formats: text html latex example chm
Note: removing empty section \examples in file 'analysis.bgx.Rd'
Note: removing empty section \examples in file 'analysis.bgx.Rd'
analysis.bgx text html latex chm
bgx text html latex example chm
Note: removing empty section \examples in file 'mcmc.bgx.Rd'
Note: removing empty section \examples in file 'mcmc.bgx.Rd'
mcmc.bgx text html latex chm
Note: removing empty section \examples in file 'readOutput.bgx.Rd'
Note: removing empty section \examples in file 'readOutput.bgx.Rd'
readOutput.bgx text html latex chm
Note: removing empty section \value in file 'saveAffinityPlot.bgx.Rd'
Note: removing empty section \details in file 'saveAffinityPlot.bgx.Rd'
Note: removing empty section \examples in file 'saveAffinityPlot.bgx.Rd'
Note: removing empty section \value in file 'saveAffinityPlot.bgx.Rd'
Note: removing empty section \details in file 'saveAffinityPlot.bgx.Rd'
Note: removing empty section \examples in file 'saveAffinityPlot.bgx.Rd'
saveAffinityPlot.bgx text html latex chm
Note: removing empty section \details in file 'setupVars.bgx.Rd'
Note: removing empty section \examples in file 'setupVars.bgx.Rd'
Note: removing empty section \details in file 'setupVars.bgx.Rd'
Note: removing empty section \examples in file 'setupVars.bgx.Rd'
setupVars.bgx text html latex chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.3-bioc\meat\R.INSTALL.2112\bgx\chm\bgx.chm
Compile time: 0 minutes, 0 seconds
7 Topics
35 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.3-bioc\meat\R.INSTALL.2112\bgx\chm\bgx.chm, 27,356 bytes
Compression decreased file by 4,950 bytes.
adding MD5 sums
packaged installation of package 'bgx' as bgx_1.6.0.zip
* DONE (bgx)