ppiStats 1.8.0
Tony Chiang
| Bioconductor Changelog | | Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/ppiStats | | Last Changed Rev: 34811 / Revision: 38965 | | Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | [ OK ] | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.6) / i386 | OK | OK | OK |
* checking for file 'ppiStats/DESCRIPTION' ... OK
* preparing 'ppiStats':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in E:/biocbld/bbs-2.3-bioc/tmpdir/Rinst540061886
---------- Making package ppiStats ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
installing R files
installing inst files
preparing package ppiStats for lazy loading
Loading required package: GO.db
Loading required package: AnnotationDbi
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: DBI
Loading required package: GOstats
Loading required package: graph
Loading required package: annotate
Loading required package: xtable
Loading required package: RBGL
Loading required package: Category
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
Loading required package: org.Sc.sgd.db
Loading required package: ppiData
Loading required package: Rgraphviz
Loading required package: grid
Attaching package: 'Rgraphviz'
The following object(s) are masked from package:annotate :
toFile
Loading required package: ScISI
Loading required package: apComplex
Loading required package: RpsiXML
Loading required package: XML
Attaching package: 'XML'
The following object(s) are masked from package:graph :
addNode
Loading required package: hypergraph
Attaching package: 'hypergraph'
The following object(s) are masked from package:Rgraphviz :
head,
tail
The following object(s) are masked from package:xtable :
label,
label<-
The following object(s) are masked from package:AnnotationDbi :
head,
tail
The following object(s) are masked from package:utils :
head,
tail
Loading required package: lattice
Loading required package: RColorBrewer
installing man source files
installing indices
installing help
>>> Building/Updating help pages for package 'ppiStats'
Formats: text html latex example chm
assessSymmetry text html latex example chm
bpMatrix text html latex example chm
calcInOutDegStats text html latex example chm
createSummaryTables text html latex example chm
degreeEstimates text html latex example chm
estErrProbMethodOfMoments text html latex example chm
estimateCCMErrorRates text html latex example chm
estimatePPIErrorRates text html latex example chm
Note: removing empty section \examples in file 'findAdjacent.Rd'
Note: removing empty section \examples in file 'findAdjacent.Rd'
findAdjacent text html latex chm
genBPGraph text html latex example chm
Note: removing empty section \references in file 'hgParams.Rd'
Note: removing empty section \examples in file 'hgParams.Rd'
Note: removing empty section \references in file 'hgParams.Rd'
Note: removing empty section \examples in file 'hgParams.Rd'
hgParams text html latex chm
Note: removing empty section \references in file 'hgTests.Rd'
Note: removing empty section \examples in file 'hgTests.Rd'
Note: removing empty section \references in file 'hgTests.Rd'
Note: removing empty section \examples in file 'hgTests.Rd'
hgTests text html latex chm
idProteinErrorType text html latex example chm
idProteinType text html latex example chm
inOutScatterCharts text html latex example chm
nullDistDoublyTestedEdges text html latex example chm
separateExptBySize text html latex chm
twPERM text html latex example chm
viabilityCharts text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.3-bioc\meat\ppiStats\chm\ppiStats.chm
Compile time: 0 minutes, 1 second
20 Topics
46 Local links
2 Internet links
1 Graphic
Created e:\biocbld\bbs-2.3-bioc\meat\ppiStats\chm\ppiStats.chm, 43,461 bytes
Compression decreased file by 29,249 bytes.
adding MD5 sums
* DONE (ppiStats)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'ppiStats_1.8.0.tar.gz'